chr2 : 28,955,393 28,955,806
413 bp 36 TFs 1 linked gene
This 413 bp open chromatin element is linked to TOGARAM2 and is bound by 36 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
TOGARAM2 803 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:28,950,393 – 28,960,806
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 255 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 212 bp overlap
BRD4 2 datasets
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 54 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 372 bp overlap
CTCF 3 datasets
ChIP HT-1080 GSE135580.CTCF.HT-1080 146 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 82 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 219 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 168 bp overlap
GSPT2 1 dataset
ChIP HEK293T GSE35197.GSPT2.HEK293T 162 bp overlap
HNF1A 1 dataset
ChIP HepG2 ENCFF540TRC 309 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 137 bp overlap
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 137 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 211 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 413 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 55 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 61 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 101 bp overlap
NFYB 4 datasets
ChIP Hep-G2 ENCSR935GZV.NFYB.Hep-G2 261 bp overlap
ChIP HepG2 ENCFF174VYX 293 bp overlap
ChIP K-562 GSE26439.NFYB.K-562 201 bp overlap
ChIP WTC11 ENCFF751ZTQ 281 bp overlap
NFYC 2 datasets
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 220 bp overlap
ChIP HepG2 ENCFF836FYP 297 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 101 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 105 bp overlap
PHF20 1 dataset
ChIP HepG2 ENCFF609JBM 234 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
SIX1 1 dataset
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
SIX2 3 datasets
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
ChIP HEK GSE73865.SIX2.HEK 235 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 156 bp overlap
STAT1 1 dataset
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
STAT3 1 dataset
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Six4 1 dataset
Motif DE_12h DE_12h-Six4_MA2001.2 7 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
TP53 1 dataset
ChIP IMR-90_APO GSE53491.TP53.IMR-90_APO 58 bp overlap
USF1 5 datasets
ChIP H1 ENCFF090WVU 67 bp overlap
ChIP HepG2 ENCFF201JKA 260 bp overlap
ChIP Ishikawa ENCFF728IEG 219 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 114 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 209 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 314 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR322CFO.ZEB2.K-562 222 bp overlap
ZNF143 5 datasets
ChIP Hep-G2 ENCSR080UEM.ZNF143.Hep-G2 384 bp overlap
ChIP K-562 GSE39263.ZNF143.K-562 255 bp overlap
ChIP K-562 ENCSR000EGP.ZNF143.K-562 156 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 302 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 313 bp overlap
ZNF766 1 dataset
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap