Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

46 transcription factors

BRD4 1 dataset

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 225 bp overlap

CEBPB 1 dataset

ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 310 bp overlap

CHD1 2 datasets

ChIP MCF-7 ENCSR360JOC.CHD1.MCF-7 82 bp overlap

ChIP WA01 ENCSR000EBU.CHD1.WA01 134 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 283 bp overlap

ESR1 2 datasets

ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 173 bp overlap

ChIP pleural-effusion GSE86538.ESR1.pleural-effusion 99 bp overlap

ESR1_pS118 1 dataset

ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 429 bp overlap

FEZF1 1 dataset

ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 241 bp overlap

FOS 1 dataset

ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 376 bp overlap

FOXA1 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 242 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 429 bp overlap

ChIP DE DE-FOXA2-2 429 bp overlap

GATA2 3 datasets

ChIP ESF GSE108408.GATA2.ESF 145 bp overlap

ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 184 bp overlap

ChIP SK-N-SH ENCFF764OZD 251 bp overlap

GATA3 3 datasets

ChIP MCF-7 GSE133072.GATA3.MCF-7 175 bp overlap

ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 172 bp overlap

ChIP SK-N-SH ENCFF040SSB 199 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 378 bp overlap

ChIP DE DE-GATA4-2 425 bp overlap

ChIP foregut GSE117136.GATA4.foregut 196 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 243 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 322 bp overlap

ChIP DE DE-GATA6-2 415 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 227 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 346 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 351 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 270 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 335 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 296 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 237 bp overlap

GATAD2A 1 dataset

ChIP HepG2 ENCFF252XNH 362 bp overlap

KMT2A 3 datasets

ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 427 bp overlap

ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 68 bp overlap

ChIP MV4-11 GSE79899.KMT2A.MV4-11 291 bp overlap

MAX 1 dataset

ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 167 bp overlap

MEIS2 1 dataset

ChIP K-562 ENCSR851BNE.MEIS2.K-562 208 bp overlap

MYBL2 1 dataset

ChIP A-673 GSE119971.MYBL2.A-673 188 bp overlap

MYC 2 datasets

ChIP NB69 GSE138295.MYC.NB69 182 bp overlap

ChIP NCI-H128 GSE41105.MYC.NCI-H128 172 bp overlap

MYCN 3 datasets

ChIP Kelly GSE94822.MYCN.Kelly 250 bp overlap

ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 214 bp overlap

ChIP SMS-KCN ERP013415.MYCN.SMS-KCN 429 bp overlap

NEUROD1 4 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 209 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 257 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 366 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 235 bp overlap

PDX1 4 datasets

ChIP hESC GSE58685.PDX1.hESC 159 bp overlap

ChIP hiPSC GSE125768.PDX1.hiPSC 281 bp overlap

ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 240 bp overlap

ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 416 bp overlap

PHIP 1 dataset

ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 429 bp overlap

PKNOX1 2 datasets

ChIP HEK293T ENCFF174WDB 255 bp overlap

ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 360 bp overlap

PRDM6 3 datasets

ChIP HEK293 ENCFF283AJL 207 bp overlap

ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 429 bp overlap

ChIP HEK293 GSE76494.PRDM6.HEK293 117 bp overlap

PSIP1 1 dataset

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 186 bp overlap

RARA 1 dataset

ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 190 bp overlap

RBFOX2 3 datasets

ChIP HepG2 ENCFF554DMZ 173 bp overlap

ChIP K-562 GSE120104.RBFOX2.K-562 429 bp overlap

ChIP K-562 ENCSR822LBD.RBFOX2.K-562 429 bp overlap

RXRB 1 dataset

ChIP HepG2 ENCFF539ZAY 353 bp overlap

SAP130 2 datasets

ChIP HepG2 ENCFF892EHZ 350 bp overlap

ChIP HepG2 ENCFF892EHZ 409 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 179 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 429 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 362 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 368 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 287 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 352 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 357 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 333 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 326 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 157 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 169 bp overlap

SMARCA4 4 datasets

ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 264 bp overlap

ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 90 bp overlap

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 429 bp overlap

ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 202 bp overlap

SMARCC1 1 dataset

ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 121 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 244 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 162 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 239 bp overlap

TBX2 1 dataset

ChIP Kelly GSE94822.TBX2.Kelly 177 bp overlap

TFAP2B 1 dataset

ChIP SK-N-SH ENCFF869XXQ 244 bp overlap

ZNF35 1 dataset

ChIP HEK293 GSE76494.ZNF35.HEK293 245 bp overlap

ZNF573 1 dataset

ChIP HEK293T GSE78099.ZNF573.HEK293T 185 bp overlap

ZNF843 1 dataset

ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 259 bp overlap

Gene	Expression	Dist. to TSS	Distance	Link type
LAPTM4A		2.1 kb	Proximal	Proximity
LAPTM4A-DT		2.6 kb	Proximal	Proximity

Genome Browser