chr21 : 39,173,869 – 39,174,375
506 bp 48 TFs 1 linked gene
This 506 bp open chromatin element is linked to PSMG1 and is bound by 48 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PSMG1 9.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:39,168,869 – 39,179,375
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
48 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 263 bp overlap
BCL11A 1 dataset
ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 99 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 270 bp overlap
ChIP K562 ENCFF963TXY 353 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 324 bp overlap
ChIP K562 ENCFF673OEZ 202 bp overlap
CEBPA 2 datasets
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 258 bp overlap
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 229 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 112 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF335XTP 295 bp overlap
ChIP BLaER1 ENCFF460KDD 222 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 62 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 250 bp overlap
EP300 2 datasets
ChIP AML GSE131939.EP300.AML 105 bp overlap
ChIP AML GSE131939.EP300.AML 93 bp overlap
ERG 1 dataset
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 339 bp overlap
ESR1 1 dataset
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 126 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 372 bp overlap
EVI1 1 dataset
ChIP SKH1_10d GSE87283.EVI1.SKH1_10d 189 bp overlap
FLI1 1 dataset
ChIP CTV-1_DSG GSE128835.FLI1.CTV-1_DSG 226 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 335 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 506 bp overlap
ChIP DE DE-FOXA2-2 506 bp overlap
GATA1 6 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 149 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 111 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 160 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 179 bp overlap
ChIP erythroblast ENCFF867JAR 493 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 420 bp overlap
GATA2 2 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 198 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 506 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 506 bp overlap
ChIP DE DE-GATA4-2 506 bp overlap
ChIP foregut GSE117136.GATA4.foregut 396 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 506 bp overlap
ChIP DE DE-GATA6-2 506 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 470 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 506 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 506 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 475 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 506 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 506 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 375 bp overlap
ChIP foregut GSE117136.GATA6.foregut 350 bp overlap
JUN 1 dataset
ChIP DE_D1 S13-DE-d1-JUN-exp1 255 bp overlap
KDM1A 1 dataset
ChIP SKNO-1_GSK690 GSE71739.KDM1A.SKNO-1_GSK690 169 bp overlap
LDB1 4 datasets
ChIP HEP GSE52637.LDB1.HEP 172 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 260 bp overlap
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 149 bp overlap
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 358 bp overlap
LMO2 1 dataset
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 239 bp overlap
LYL1 1 dataset
ChIP TSU-1621MT GSE60477.LYL1.TSU-1621MT 328 bp overlap
MECOM 1 dataset
ChIP SKH1_CEBPA-ER_E2 GSE102697.MECOM.SKH1_CEBPA-ER_E2 249 bp overlap
MITF 1 dataset
ChIP 501-mel GSE61965.MITF.501-mel 163 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 141 bp overlap
MYOD1 4 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 243 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 193 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 144 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 184 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 171 bp overlap
POLR2A 1 dataset
ChIP HL-60 ENCFF321XKE 78 bp overlap
POLR2B 1 dataset
ChIP K562 ENCFF513ENO 174 bp overlap
RNF2 1 dataset
ChIP ME-1_KD GSE128771.RNF2.ME-1_KD 254 bp overlap
RUNX1 3 datasets
ChIP ME-1 GSE46044.RUNX1.ME-1 290 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.RUNX1.ME-1_CBFB-MYH11-KD 396 bp overlap
ChIP ME-1_Con GSE128771.RUNX1.ME-1_Con 396 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 169 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 411 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 285 bp overlap
SMARCA4 2 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 317 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 370 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 273 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 375 bp overlap
SPI1 5 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 148 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 390 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 324 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 180 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 187 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 506 bp overlap
TAL1 14 datasets
ChIP CD34 GSE52924.TAL1.CD34 223 bp overlap
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 347 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 151 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 259 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 262 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 174 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 236 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 226 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 264 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 237 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 226 bp overlap
ChIP K562 ENCFF661CCK 277 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 170 bp overlap
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 394 bp overlap
TCF12 3 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 292 bp overlap
ChIP K562 ENCFF931DJY 172 bp overlap
ChIP ME-1 GSE46044.TCF12.ME-1 226 bp overlap
TCF3 3 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 209 bp overlap
ChIP K562 ENCFF319QZT 371 bp overlap
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 506 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 110 bp overlap
ZNF19 1 dataset
ChIP HEK293T GSE78099.ZNF19.HEK293T 294 bp overlap
ZNF700 2 datasets
ChIP K-562 ENCSR959BQO.ZNF700.K-562 323 bp overlap
ChIP K562 ENCFF657OXY 305 bp overlap
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