chr20:12,753,782–12,754,273

chr20 : 12,753,782 – 12,754,273

491 bp 34 TFs 1 linked gene

This 491 bp open chromatin element is linked to TASP1 and is bound by 34 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
TASP1		884.8 kb	Distal	Multiome+HiCAR

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

34 transcription factors

CEBPD 1 dataset

Motif ES_0h ES_0h-CEBPD_MA0836.3 8 bp overlap

CREB1 3 datasets

Motif ES_0h ES_0h-CREB1_MA0018.5 8 bp overlap

Motif ES_0h ES_0h-CREB1_MA0018.5 8 bp overlap

ChIP GM23338 ENCFF432ZEW 305 bp overlap

Motif ES_0h ES_0h-ELF1_MA0473.4 9 bp overlap

GABPA 1 dataset

Motif ES_0h ES_0h-GABPA_MA0062.4 10 bp overlap

GATA6 3 datasets

ChIP DE_D1 S14-DE-d1-GATA6-exp1 230 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 491 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 71 bp overlap

Motif ES_0h ES_0h-Hmx2_MA0897.2 15 bp overlap

Motif ES_0h ES_0h-Hmx3_MA0898.2 9 bp overlap

Motif ES_0h ES_0h-ISL2_MA0914.2 6 bp overlap

Ikzf3 1 dataset

Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 360 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 293 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 408 bp overlap

Motif ES_0h ES_0h-JUN_MA0488.2 10 bp overlap

Motif ES_0h ES_0h-JUN_MA0488.2 10 bp overlap

MAFF 2 datasets

Motif ES_0h ES_0h-MAFF_MA0495.4 11 bp overlap

Motif ES_0h ES_0h-MAFF_MA0495.4 11 bp overlap

MEIS1 1 dataset

Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap

MGA::EVX1 1 dataset

Motif ES_0h ES_0h-MGAEVX1_MA1960.2 11 bp overlap

Mafb 2 datasets

Motif ES_0h ES_0h-Mafb_MA0117.3 11 bp overlap

Motif ES_0h ES_0h-Mafb_MA0117.3 11 bp overlap

NANOG 6 datasets

ChIP GM23338 ENCFF065NZG 111 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 257 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 180 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 196 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 171 bp overlap

ChIP hESC GSE18292.NANOG.hESC 93 bp overlap

Motif ES_0h ES_0h-NRL_MA0842.3 12 bp overlap

Motif ES_0h ES_0h-NRL_MA0842.3 12 bp overlap

Nkx3-2 1 dataset

Motif ES_0h ES_0h-Nkx3-2_MA0122.4 10 bp overlap

POLR2A 1 dataset

ChIP GM23338 ENCFF450WCS 151 bp overlap

POU5F1 2 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 378 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 230 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 269 bp overlap

SMAD2_3 1 dataset

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 333 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S15-DE-d1-BAF155-exp1 108 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 57 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 152 bp overlap

STAT1 1 dataset

Motif ES_0h ES_0h-STAT1_MA0137.4 9 bp overlap

STAT3 1 dataset

Motif ES_0h ES_0h-STAT3_MA0144.3 9 bp overlap

Stat4 1 dataset

Motif ES_0h ES_0h-Stat4_MA0518.2 10 bp overlap

TBX19 1 dataset

Motif ES_0h ES_0h-TBX19_MA0804.2 17 bp overlap

TEAD1 2 datasets

Motif ES_0h ES_0h-TEAD1_MA0090.4 9 bp overlap

ChIP WTC11 ENCFF502QUV 260 bp overlap

TEAD2 1 dataset

Motif ES_0h ES_0h-TEAD2_MA1121.2 7 bp overlap

TEAD3 1 dataset

Motif ES_0h ES_0h-TEAD3_MA0808.1 8 bp overlap

TEAD4 1 dataset

Motif ES_0h ES_0h-TEAD4_MA0809.3 8 bp overlap

ZNF140 1 dataset

Motif ES_0h ES_0h-ZNF140_MA1589.2 19 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCFF896CCA 251 bp overlap

ZNF684 1 dataset

Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap