chr20 : 9,830,016 9,830,193
177 bp 27 TFs 1 linked gene
This 177 bp open chromatin element is linked to PAK5 and is bound by 27 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PAK5 8.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:9,825,016 – 9,835,193
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 123 bp overlap
CREB1 3 datasets
ChIP GM23338 ENCFF432ZEW 167 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 74 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 105 bp overlap
FOSL1 1 dataset
ChIP BT-549 GSE112961.FOSL1.BT-549 72 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 177 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 123 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 85 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 177 bp overlap
HNF4A 4 datasets
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 65 bp overlap
ChIP Hep-G2 ERP000209.HNF4A.Hep-G2 69 bp overlap
ChIP HepG2 ENCFF146SSF 108 bp overlap
ChIP liver ENCFF449HPV 130 bp overlap
JUND 1 dataset
ChIP Hep-G2 ENCSR000BGK.JUND.Hep-G2 111 bp overlap
MIER2 1 dataset
ChIP HepG2 ENCFF997QIX 177 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHF.NR3C1.A-549 143 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 126 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 177 bp overlap
POU5F1 1 dataset
ChIP hiPSC GSE56567.POU5F1.hiPSC 162 bp overlap
REST 28 datasets
ChIP A-549 ENCSR892DRK.REST.A-549 177 bp overlap
ChIP GM12878 ENCSR000BGF.REST.GM12878 137 bp overlap
ChIP GM12878 ENCSR000BQS.REST.GM12878 139 bp overlap
ChIP GM23338 ENCFF024TCL 177 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 173 bp overlap
ChIP H1 ENCFF203SWY 177 bp overlap
ChIP H1 ENCFF203SWY 124 bp overlap
ChIP H1 ENCFF429RUE 177 bp overlap
ChIP HL-60 ENCSR000BTF.REST.HL-60 168 bp overlap
ChIP HeLa-S3 ENCFF911DTC 177 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 175 bp overlap
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 177 bp overlap
ChIP Hep-G2 ENCSR000BJL.REST.Hep-G2 117 bp overlap
ChIP HepG2 ENCFF122AWR 177 bp overlap
ChIP Ishikawa ENCFF456OHV 177 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 176 bp overlap
ChIP MCF-7 ENCFF893RRD 177 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 166 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 177 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 177 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 177 bp overlap
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 177 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 173 bp overlap
ChIP hiPSC_IIA11 GSE106870.REST.hiPSC_IIA11 119 bp overlap
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 177 bp overlap
ChIP liver ENCFF240FWT 177 bp overlap
ChIP liver ENCSR893QWP.REST.liver 177 bp overlap
ChIP liver ENCSR867WPH.REST.liver 164 bp overlap
SIX5 1 dataset
ChIP H1 ENCFF942SOJ 53 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 53 bp overlap
SOX2 2 datasets
ChIP RENVM GSE49404.SOX2.RENVM 124 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 142 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 115 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 82 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 111 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 131 bp overlap
THAP11 1 dataset
ChIP HepG2 ENCFF272SWH 177 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 87 bp overlap
ZNF143 3 datasets
ChIP Hep-G2 ENCSR080UEM.ZNF143.Hep-G2 73 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 54 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 123 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 166 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 156 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 140 bp overlap