chr19 : 24,075,502 24,075,880
378 bp 35 TFs 1 linked gene
This 378 bp open chromatin element is linked to ENSG00000279425 and is bound by 35 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000279425 2.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:24,070,502 – 24,080,880
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 371 bp overlap
ChIP H1 ENCFF399KAM 378 bp overlap
CEBPB 1 dataset
ChIP H1 ENCFF871PTR 261 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCFF432ZEW 280 bp overlap
CTCF 4 datasets
ChIP BE2C ENCFF757SRF 268 bp overlap
ChIP C4-2B ENCFF821XVN 378 bp overlap
ChIP GM23338 ENCFF531QOI 277 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 112 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP H1 ENCFF937OPV 67 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 125 bp overlap
ESR1 1 dataset
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 107 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 369 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCFF485YIB 341 bp overlap
GATA3 2 datasets
ChIP Kelly GSE65664.GATA3.Kelly 156 bp overlap
ChIP MCF-7 ENCFF352QVM 310 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 249 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-2 251 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 378 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 378 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 378 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 219 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 242 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 250 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 106 bp overlap
JUN 4 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 247 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 181 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 266 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 378 bp overlap
NANOG 2 datasets
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 204 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF566JSR 378 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 331 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 341 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 232 bp overlap
RXRA 1 dataset
ChIP H1 ENCFF570NHK 201 bp overlap
SETDB1 3 datasets
ChIP HEK293 ENCFF676PLV 378 bp overlap
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 290 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 289 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 238 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 278 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 325 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 328 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 372 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 142 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 275 bp overlap
SP1 1 dataset
ChIP H1 ENCFF263FUH 310 bp overlap
TAF1 1 dataset
ChIP H1 ENCFF478SZO 289 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 112 bp overlap
TCF7L2 2 datasets
ChIP HEK293 ENCFF513JQN 349 bp overlap
ChIP HEK293 ENCFF513JQN 332 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 309 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 362 bp overlap
TRIM28 3 datasets
ChIP HEK293 ENCFF265CEM 378 bp overlap
ChIP HEK293 ENCFF582MWI 361 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 66 bp overlap
USF1 1 dataset
ChIP WTC11 ENCFF699QGS 349 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 378 bp overlap
ZNF114 2 datasets
ChIP GM23338 ENCFF631OSW 315 bp overlap
ChIP GM23338 ENCFF631OSW 217 bp overlap