chr18 : 42,937,847 42,938,012
165 bp 30 TFs 0 linked genes
This 165 bp open chromatin element has no linked target genes and is bound by 30 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:42,932,847 – 42,943,012
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 165 bp overlap
BNC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 165 bp overlap
BRD4 2 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 120 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 165 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 106 bp overlap
CSDC2 2 datasets
ChIP SK-N-SH ENCFF868MXA 157 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 165 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 160 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 111 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 58 bp overlap
GATA2 2 datasets
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 165 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 117 bp overlap
GATA3 3 datasets
ChIP BE2C GSE65664.GATA3.BE2C 165 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 124 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 165 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 77 bp overlap
ChIP DE DE-GATA4-2 146 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 62 bp overlap
ChIP foregut GSE117136.GATA4.foregut 66 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 165 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-2 165 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 98 bp overlap
GLIS3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR507BWM.GLIS3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 129 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 64 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 165 bp overlap
MAML3 2 datasets
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 148 bp overlap
ChIP SK-N-SH_RA GSE69119.MAML3.SK-N-SH_RA 121 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCFF746HVJ 165 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94822.MYCN.Kelly 70 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 54 bp overlap
PATZ1 1 dataset
ChIP SK-N-SH ENCFF650NCN 162 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 165 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 87 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 165 bp overlap
RAD21 1 dataset
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 160 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 165 bp overlap
SMARCA4 3 datasets
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 105 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 165 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 165 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 165 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 165 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 165 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 161 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 165 bp overlap