chr17 : 12,567,118 – 12,567,374

256 bp 97 TFs 0 linked genes

This 256 bp open chromatin element has no linked target genes and is bound by 97 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

97 transcription factors

ALX3 1 dataset

Motif DE_24h DE_24h-ALX3_MA0634.2 6 bp overlap

ARGFX 1 dataset

Motif DE_24h DE_24h-ARGFX_MA1463.2 8 bp overlap

ARID1A 1 dataset

ChIP NGP GSE134626.ARID1A.NGP 235 bp overlap

Alx1 1 dataset

Motif DE_24h DE_24h-Alx1_MA0854.2 8 bp overlap

Alx4 1 dataset

Motif DE_24h DE_24h-Alx4_MA0853.2 12 bp overlap

Arid3a 1 dataset

Motif DE_24h DE_24h-Arid3a_MA0151.1 6 bp overlap

Arx 1 dataset

Motif DE_24h DE_24h-Arx_MA0874.2 10 bp overlap

DRGX 1 dataset

Motif DE_24h DE_24h-DRGX_MA1481.2 6 bp overlap

DUX4 1 dataset

Motif DE_24h DE_24h-DUX4_MA0468.1 11 bp overlap

DUXA 1 dataset

Motif DE_24h DE_24h-DUXA_MA0884.2 13 bp overlap

Dux 1 dataset

Motif DE_24h DE_24h-Dux_MA0611.3 11 bp overlap

EMX1 1 dataset

Motif DE_24h DE_24h-EMX1_MA0612.3 6 bp overlap

EMX2 1 dataset

Motif DE_24h DE_24h-EMX2_MA0886.2 6 bp overlap

EN1 1 dataset

Motif DE_24h DE_24h-EN1_MA0027.3 6 bp overlap

EN2 1 dataset

Motif DE_24h DE_24h-EN2_MA0642.3 7 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 256 bp overlap

ESX1 1 dataset

Motif DE_24h DE_24h-ESX1_MA0644.3 7 bp overlap

EVX1 1 dataset

Motif DE_24h DE_24h-EVX1_MA0887.2 6 bp overlap

EVX2 1 dataset

Motif DE_24h DE_24h-EVX2_MA0888.2 6 bp overlap

FOS 1 dataset

Motif DE_24h DE_24h-FOS_MA0476.2 8 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 256 bp overlap

ChIP DE DE-FOXA2-2 256 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 256 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 243 bp overlap

ChIP DE DE-GATA6-2 256 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 256 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 256 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 256 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 256 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 256 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 247 bp overlap

GBX1 1 dataset

Motif DE_24h DE_24h-GBX1_MA0889.2 7 bp overlap

GSX1 1 dataset

Motif DE_24h DE_24h-GSX1_MA0892.2 6 bp overlap

GSX2 1 dataset

Motif DE_24h DE_24h-GSX2_MA0893.3 7 bp overlap

HOXA1 1 dataset

Motif DE_24h DE_24h-HOXA1_MA1495.2 6 bp overlap

HOXA10 1 dataset

Motif DE_24h DE_24h-HOXA10_MA0899.2 9 bp overlap

HOXA2 1 dataset

Motif DE_24h DE_24h-HOXA2_MA0900.3 6 bp overlap

HOXA3 1 dataset

Motif DE_24h DE_24h-HOXA3_MA2119.1 7 bp overlap

HOXB1 1 dataset

Motif DE_24h DE_24h-HOXB1_MA2093.1 7 bp overlap

HOXB2 1 dataset

Motif DE_24h DE_24h-HOXB2_MA0902.3 6 bp overlap

HOXB3 1 dataset

Motif DE_24h DE_24h-HOXB3_MA0903.2 6 bp overlap

HOXB5 1 dataset

Motif DE_24h DE_24h-HOXB5_MA0904.3 6 bp overlap

HOXC8 1 dataset

Motif DE_24h DE_24h-HOXC8_MA1505.2 6 bp overlap

HOXD3 1 dataset

Motif DE_24h DE_24h-HOXD3_MA0912.2 8 bp overlap

Hnf1A 1 dataset

Motif DE_24h DE_24h-Hnf1A_MA1991.2 10 bp overlap

ISX 1 dataset

Motif DE_24h DE_24h-ISX_MA0654.2 6 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 256 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 229 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 256 bp overlap

Jun 1 dataset

Motif DE_24h DE_24h-Jun_MA0489.3 8 bp overlap

LBX1 1 dataset

Motif DE_24h DE_24h-LBX1_MA0618.2 7 bp overlap

LHX5 1 dataset

Motif DE_24h DE_24h-LHX5_MA1519.2 7 bp overlap

LHX6 1 dataset

Motif DE_24h DE_24h-LHX6_MA0658.2 8 bp overlap

LHX9 1 dataset

Motif DE_24h DE_24h-LHX9_MA0701.3 7 bp overlap

LMX1A 1 dataset

Motif DE_24h DE_24h-LMX1A_MA0702.3 7 bp overlap

LMX1B 1 dataset

Motif DE_24h DE_24h-LMX1B_MA0703.3 8 bp overlap

Lef1 1 dataset

Motif DE_24h DE_24h-Lef1_MA0768.3 8 bp overlap

Lhx1 1 dataset

Motif DE_24h DE_24h-Lhx1_MA1518.3 10 bp overlap

Lhx3 1 dataset

Motif DE_24h DE_24h-Lhx3_MA0135.2 12 bp overlap

Lhx4 1 dataset

Motif DE_24h DE_24h-Lhx4_MA0704.2 6 bp overlap

Lhx8 1 dataset

Motif DE_24h DE_24h-Lhx8_MA0705.2 6 bp overlap

MAX::MYC 1 dataset

Motif DE_24h DE_24h-MAXMYC_MA0059.2 10 bp overlap

MEOX1 1 dataset

Motif DE_24h DE_24h-MEOX1_MA0661.2 7 bp overlap

MEOX2 1 dataset

Motif DE_24h DE_24h-MEOX2_MA0706.2 7 bp overlap

MGA::EVX1 1 dataset

Motif DE_24h DE_24h-MGAEVX1_MA1960.2 11 bp overlap

MIXL1 1 dataset

Motif DE_24h DE_24h-MIXL1_MA0662.2 6 bp overlap

MNX1 1 dataset

Motif DE_24h DE_24h-MNX1_MA0707.3 6 bp overlap

MXI1 1 dataset

Motif DE_24h DE_24h-MXI1_MA1108.3 6 bp overlap

NEUROD1 2 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 256 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 227 bp overlap

NKX6-1 1 dataset

Motif DE_24h DE_24h-NKX6-1_MA0674.2 7 bp overlap

NKX6-2 1 dataset

Motif DE_24h DE_24h-NKX6-2_MA0675.2 6 bp overlap

NOTO 1 dataset

Motif DE_24h DE_24h-NOTO_MA0710.2 7 bp overlap

PAX4 1 dataset

Motif DE_24h DE_24h-PAX4_MA0068.2 8 bp overlap

PDX1 1 dataset

Motif DE_24h DE_24h-PDX1_MA0132.3 6 bp overlap

PHOX2A 1 dataset

Motif DE_24h DE_24h-PHOX2A_MA0713.1 11 bp overlap

PHOX2B 1 dataset

Motif DE_24h DE_24h-PHOX2B_MA0681.3 12 bp overlap

POU6F1 1 dataset

Motif DE_24h DE_24h-POU6F1_MA0628.2 6 bp overlap

POU6F2 1 dataset

Motif DE_24h DE_24h-POU6F2_MA0793.2 9 bp overlap

PROP1 1 dataset

Motif DE_24h DE_24h-PROP1_MA0715.1 11 bp overlap

PRRX1 1 dataset

Motif DE_24h DE_24h-PRRX1_MA0716.2 6 bp overlap

PRRX2 1 dataset

Motif DE_24h DE_24h-PRRX2_MA0075.4 7 bp overlap

RAX2 1 dataset

Motif DE_24h DE_24h-RAX2_MA0717.2 6 bp overlap

SHOX 1 dataset

Motif DE_24h DE_24h-SHOX_MA0630.2 6 bp overlap

SIX2 2 datasets

ChIP HEK GSE73865.SIX2.HEK 187 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 153 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 256 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 256 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 256 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 256 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 256 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 256 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 256 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 195 bp overlap

SMARCC1 3 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 104 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 126 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 157 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 191 bp overlap

SP7 2 datasets

ChIP HEK293 ENCFF733RBE 219 bp overlap

ChIP HEK293 ENCSR468IJT.SP7.HEK293 226 bp overlap

Shox2 1 dataset

Motif DE_24h DE_24h-Shox2_MA0720.2 6 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 196 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 232 bp overlap

TBR1 1 dataset

Motif DE_24h DE_24h-TBR1_MA0802.2 9 bp overlap

TBX21 1 dataset

Motif DE_24h DE_24h-TBX21_MA0690.3 10 bp overlap

TBX3 1 dataset

Motif DE_24h DE_24h-TBX3_MA1566.3 9 bp overlap

TBX5 1 dataset

ChIP hiPSC GSE81585.TBX5.hiPSC 167 bp overlap

TCF7 1 dataset

Motif DE_24h DE_24h-TCF7_MA0769.3 7 bp overlap

TLX2 1 dataset

Motif DE_24h DE_24h-TLX2_MA1577.2 6 bp overlap

TRIM28 2 datasets

ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 162 bp overlap

ChIP U2OS ENCSR000EYC.TRIM28.U2OS 181 bp overlap

UNCX 1 dataset

Motif DE_24h DE_24h-UNCX_MA0721.2 6 bp overlap

VAX1 1 dataset

Motif DE_24h DE_24h-VAX1_MA0722.2 7 bp overlap

VAX2 1 dataset

Motif DE_24h DE_24h-VAX2_MA0723.3 6 bp overlap

VSX1 1 dataset

Motif DE_24h DE_24h-VSX1_MA0725.2 7 bp overlap

VSX2 1 dataset

Motif DE_24h DE_24h-VSX2_MA0726.2 7 bp overlap

ZNF24 1 dataset

Motif DE_24h DE_24h-ZNF24_MA1124.1 13 bp overlap

ZNF324 1 dataset

Motif DE_24h DE_24h-ZNF324_MA1977.2 14 bp overlap

mix-a 1 dataset

Motif DE_24h DE_24h-mix-a_MA0621.2 7 bp overlap