chr1 : 241,767,621 – 241,768,469

848 bp 60 TFs 0 linked genes

This 848 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

60 transcription factors

AR 1 dataset

ChIP LNCaP GSE80256.AR.LNCaP 246 bp overlap

Ahr::Arnt 1 dataset

Motif DE_60h DE_60h-AhrArnt_MA0006.2 5 bp overlap

BARX2 1 dataset

Motif DE_60h DE_60h-BARX2_MA1471.2 9 bp overlap

BRD4 2 datasets

ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 352 bp overlap

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 697 bp overlap

Bach1::Mafk 1 dataset

Motif DE_60h DE_60h-Bach1Mafk_MA0591.2 12 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 205 bp overlap

EP300 1 dataset

ChIP neural ENCSR843ZUP.EP300.neural 303 bp overlap

ERG 1 dataset

ChIP Jurkat GSE49091.ERG.Jurkat 148 bp overlap

FEZF2 1 dataset

Motif DE_60h DE_60h-FEZF2_MA2341.1 8 bp overlap

FIGLA 2 datasets

Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap

Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 545 bp overlap

ChIP DE DE-FOXA2-2 547 bp overlap

GATA1 2 datasets

ChIP K-562 GSE107726.GATA1.K-562 164 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 165 bp overlap

GATA2 1 dataset

ChIP K562 ENCFF830LLA 577 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 560 bp overlap

ChIP DE DE-GATA4-2 613 bp overlap

GATA6 3 datasets

ChIP DE DE-GATA6-1 497 bp overlap

ChIP DE DE-GATA6-2 732 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 389 bp overlap

HIC2 1 dataset

Motif DE_60h DE_60h-HIC2_MA0738.2 6 bp overlap

INSM1 1 dataset

Motif DE_60h DE_60h-INSM1_MA0155.1 12 bp overlap

JDP2 1 dataset

Motif DE_60h DE_60h-JDP2_MA0655.1 9 bp overlap

MAF 1 dataset

Motif DE_60h DE_60h-MAF_MA1520.2 13 bp overlap

MAF::NFE2 1 dataset

Motif DE_60h DE_60h-MAFNFE2_MA0501.2 11 bp overlap

MAFA 1 dataset

Motif DE_60h DE_60h-MAFA_MA1521.2 13 bp overlap

MAFK 1 dataset

Motif DE_60h DE_60h-MAFK_MA0496.4 10 bp overlap

MAZ 1 dataset

Motif DE_60h DE_60h-MAZ_MA1522.2 8 bp overlap

MEIS1 1 dataset

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

MYOD1 2 datasets

Motif DE_48h DE_48h-MYOD1_MA0499.3 9 bp overlap

Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap

Mafg 1 dataset

Motif DE_60h DE_60h-Mafg_MA0659.4 12 bp overlap

NFE2 1 dataset

Motif DE_60h DE_60h-NFE2_MA0841.2 10 bp overlap

NFIC::TLX1 1 dataset

Motif DE_60h DE_60h-NFICTLX1_MA0119.1 14 bp overlap

NKX2-3 2 datasets

Motif DE_48h DE_48h-NKX2-3_MA0672.2 8 bp overlap

Motif DE_60h DE_60h-NKX2-3_MA0672.2 8 bp overlap

NKX2-4 2 datasets

Motif DE_48h DE_48h-NKX2-4_MA2003.2 8 bp overlap

Motif DE_60h DE_60h-NKX2-4_MA2003.2 8 bp overlap

NKX2-8 2 datasets

Motif DE_48h DE_48h-NKX2-8_MA0673.2 8 bp overlap

Motif DE_60h DE_60h-NKX2-8_MA0673.2 8 bp overlap

Nkx2-1 2 datasets

Motif DE_48h DE_48h-Nkx2-1_MA1994.2 7 bp overlap

Motif DE_60h DE_60h-Nkx2-1_MA1994.2 7 bp overlap

PKNOX2 2 datasets

Motif DE_48h DE_48h-PKNOX2_MA0783.1 12 bp overlap

Motif DE_60h DE_60h-PKNOX2_MA0783.1 12 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 385 bp overlap

Ptf1A 2 datasets

Motif DE_48h DE_48h-Ptf1A_MA1620.2 8 bp overlap

Motif DE_60h DE_60h-Ptf1A_MA1620.2 8 bp overlap

RUNX1T1 1 dataset

ChIP Kasumi-1_E2 GSE102697.RUNX1T1.Kasumi-1_E2 105 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 169 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 386 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 240 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 137 bp overlap

SNAI2 2 datasets

Motif DE_48h DE_48h-SNAI2_MA0745.3 8 bp overlap

Motif DE_60h DE_60h-SNAI2_MA0745.3 8 bp overlap

SNAI3 2 datasets

Motif DE_48h DE_48h-SNAI3_MA1559.2 9 bp overlap

Motif DE_60h DE_60h-SNAI3_MA1559.2 9 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 318 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 390 bp overlap

SREBF2 1 dataset

Motif DE_60h DE_60h-SREBF2_MA0596.1 10 bp overlap

Stat6 1 dataset

Motif DE_60h DE_60h-Stat6_MA0520.2 10 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 188 bp overlap

TBX1 1 dataset

Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap

TBX21 1 dataset

Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap

TFAP2A 1 dataset

Motif DE_60h DE_60h-TFAP2A_MA0810.2 11 bp overlap

TP63 1 dataset

ChIP foreskin GSE126390.TP63.foreskin 159 bp overlap

VEZF1 2 datasets

ChIP K-562 ENCSR189YMA.VEZF1.K-562 322 bp overlap

ChIP K562 ENCFF053XDV 302 bp overlap

ZBTB1 2 datasets

ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 123 bp overlap

ChIP Jurkat_ZBTB1-KO_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_cDNA 150 bp overlap

ZEB1 2 datasets

Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap

Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap

ZIM3 1 dataset

ChIP HEK293T GSE78099.ZIM3.HEK293T 91 bp overlap

ZNF148 1 dataset

Motif DE_60h DE_60h-ZNF148_MA1653.2 10 bp overlap

ZNF530 1 dataset

Motif DE_60h DE_60h-ZNF530_MA1981.2 14 bp overlap

ZNF547 1 dataset

Motif DE_60h DE_60h-ZNF547_MA2334.1 13 bp overlap

ZNF75A 1 dataset

Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap

ZSCAN4 1 dataset

Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap