chr16 : 54,292,246 54,292,560
314 bp 32 TFs 2 linked genes
This 314 bp open chromatin element is linked to IRX3 and ENSG00000283689 and is bound by 32 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
IRX3 5.5 kb Proximal Proximity
ENSG00000283689 6.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:54,287,246 – 54,297,560
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 144 bp overlap
BRD4 1 dataset
ChIP Jurkat GSE83777.BRD4.Jurkat 165 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 54 bp overlap
CTCF 3 datasets
ChIP DND-41 ENCFF913MRA 199 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 139 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 257 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 222 bp overlap
ETS1 2 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 121 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 93 bp overlap
ETV1 2 datasets
ChIP COLO-800 GSE80443.ETV1.COLO-800 96 bp overlap
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 148 bp overlap
EZH2 2 datasets
ChIP GM23338 ENCFF613YON 205 bp overlap
ChIP Jurkat_KO GSE147198.EZH2.Jurkat_KO 235 bp overlap
FOXA1 3 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 246 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 148 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 71 bp overlap
FOXA2 5 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 166 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 232 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 85 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 180 bp overlap
ChIP HepG2 ENCFF570ABM 134 bp overlap
FOXF1 1 dataset
ChIP GIST-T1 GSE106624.FOXF1.GIST-T1 137 bp overlap
FOXL2 2 datasets
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 202 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 231 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 135 bp overlap
GFI1B 1 dataset
ChIP SET-2 GSE121424.GFI1B.SET-2 59 bp overlap
KDM1A 1 dataset
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 62 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 178 bp overlap
MED1 4 datasets
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 134 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 83 bp overlap
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 74 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 92 bp overlap
MYB 3 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 183 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 92 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 178 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 103 bp overlap
NR3C1 1 dataset
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 92 bp overlap
ONECUT2 1 dataset
ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 72 bp overlap
RAD21 1 dataset
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 96 bp overlap
RUNX1 4 datasets
ChIP Jurkat GSE68976.RUNX1.Jurkat 66 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 66 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 86 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 120 bp overlap
SMARCA4 3 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 88 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 121 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 178 bp overlap
SMARCC1 2 datasets
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 308 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 130 bp overlap
SPI1 4 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 118 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 106 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 87 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 96 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 129 bp overlap
STAT3 1 dataset
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 113 bp overlap
SUZ12 1 dataset
ChIP hiPSC GSE124903.SUZ12.hiPSC 195 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 59 bp overlap
TP63 1 dataset
ChIP BxPC-3 GSE115461.TP63.BxPC-3 200 bp overlap