chr15 : 65,289,512 65,289,739
227 bp 28 TFs 2 linked genes
This 227 bp open chromatin element is linked to PARP16 and RNU5A-1 and is bound by 28 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
PARP16 2.6 kb Proximal Proximity
RNU5A-1 6.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:65,284,512 – 65,294,739
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 227 bp overlap
ChIP K562 ENCFF938UXQ 138 bp overlap
BCOR 2 datasets
ChIP K-562 ENCSR808AKZ.BCOR.K-562 155 bp overlap
ChIP K562 ENCFF343XWA 135 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 158 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 227 bp overlap
ELF2 1 dataset
ChIP K562 ENCFF787SME 166 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 227 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 222 bp overlap
ChIP DE DE-FOXA2-1 227 bp overlap
ChIP DE DE-FOXA2-2 227 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 227 bp overlap
GATA1 7 datasets
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 144 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 208 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 147 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 227 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 227 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 184 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 210 bp overlap
GATA2 4 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 185 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 227 bp overlap
ChIP K562 ENCFF830LLA 227 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 227 bp overlap
GATA4 8 datasets
ChIP A-549 GSE85002.GATA4.A-549 197 bp overlap
ChIP DE DE-GATA4-1 227 bp overlap
ChIP DE DE-GATA4-2 227 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 227 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 227 bp overlap
ChIP foregut GSE117136.GATA4.foregut 227 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 227 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 227 bp overlap
GATA6 16 datasets
ChIP AGS GSE51705.GATA6.AGS 227 bp overlap
ChIP AGS GSE51936.GATA6.AGS 87 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 227 bp overlap
ChIP DE DE-GATA6-1 227 bp overlap
ChIP DE DE-GATA6-2 227 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 220 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 227 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 220 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 227 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 227 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 227 bp overlap
ChIP foregut GSE117136.GATA6.foregut 227 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 227 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 227 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 227 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 227 bp overlap
GTF2I 1 dataset
ChIP K562 ENCFF539BYI 92 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 186 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 96 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 227 bp overlap
MYCN 1 dataset
ChIP SH-EP_MYCNER_minOHT GSE111905.MYCN.SH-EP_MYCNER_minOHT 117 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 227 bp overlap
NR2F6 2 datasets
ChIP K-562 ENCSR707QWA.NR2F6.K-562 195 bp overlap
ChIP K562 ENCFF674RQA 227 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 227 bp overlap
ChIP K562 ENCFF236IUS 191 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 227 bp overlap
ChIP K562 ENCFF059YCJ 135 bp overlap
SPI1 1 dataset
ChIP BDMC_donorH GSE128834.SPI1.BDMC_donorH 83 bp overlap
TAL1 1 dataset
ChIP ProEs GSE59087.TAL1.ProEs 189 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 177 bp overlap
ZMYM3 1 dataset
ChIP K562 ENCFF361LXT 72 bp overlap
ZNF121 3 datasets
ChIP HEK293 ENCFF839FUF 117 bp overlap
ChIP HEK293 GSE76494.ZNF121.HEK293 88 bp overlap
ChIP K562 ENCFF314GND 133 bp overlap
ZNF22 1 dataset
ChIP HEK293 GSE76494.ZNF22.HEK293 176 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 78 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 121 bp overlap