chr1 : 232,308,668 232,309,101
433 bp 40 TFs 0 linked genes
This 433 bp open chromatin element has no linked target genes and is bound by 40 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:232,303,668 – 232,314,101
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 148 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 250 bp overlap
E2F1 1 dataset
ChIP HeLa GSE22478.E2F1.HeLa 161 bp overlap
E2F6 2 datasets
Motif DE_36h DE_36h-E2F6_MA0471.3 8 bp overlap
Motif DE_36h DE_36h-E2F6_MA0471.3 8 bp overlap
FIGLA 1 dataset
Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 310 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 157 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 206 bp overlap
MYB 1 dataset
ChIP MOLT-3 GSE59657.MYB.MOLT-3 139 bp overlap
NFIA 1 dataset
Motif DE_36h DE_36h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_36h DE_36h-NFIX_MA0671.2 6 bp overlap
PRDM9 1 dataset
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
RBPJ 2 datasets
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
RELA 5 datasets
ChIP HUVEC-C_TNF-30min GSE121890.RELA.HUVEC-C_TNF-30min 180 bp overlap
ChIP HUVEC-C_TNF_30M GSE34500.RELA.HUVEC-C_TNF_30M 180 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 161 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 205 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 345 bp overlap
REST 1 dataset
Motif DE_36h DE_36h-REST_MA0138.3 20 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 306 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 397 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 433 bp overlap
SP1 1 dataset
Motif DE_36h DE_36h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif DE_36h DE_36h-SP2_MA0516.3 9 bp overlap
SP5 1 dataset
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
SPIC 1 dataset
Motif DE_36h DE_36h-SPIC_MA0687.2 13 bp overlap
TBX3 1 dataset
Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap
TCF4 1 dataset
Motif DE_36h DE_36h-TCF4_MA0830.3 8 bp overlap
ZEB1 1 dataset
Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap
ZFX 1 dataset
ChIP HEK293T ENCFF402JZW 433 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 178 bp overlap
ZNF184 1 dataset
Motif DE_36h DE_36h-ZNF184_MA2120.1 13 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 120 bp overlap
ZNF282 1 dataset
Motif DE_36h DE_36h-ZNF282_MA1154.2 15 bp overlap
ZNF30 1 dataset
ChIP HEK293 GSE76494.ZNF30.HEK293 62 bp overlap
ZNF530 1 dataset
Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap
ZNF680 1 dataset
Motif DE_36h DE_36h-ZNF680_MA1729.2 11 bp overlap
ZNF684 1 dataset
Motif DE_36h DE_36h-ZNF684_MA1600.2 14 bp overlap
ZNF75A 1 dataset
Motif DE_36h DE_36h-ZNF75A_MA2097.1 12 bp overlap
ZSCAN29 1 dataset
Motif DE_36h DE_36h-ZSCAN29_MA1602.2 11 bp overlap
Zfp809 1 dataset
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap