chr15 : 32,028,993 – 32,029,191
198 bp 31 TFs 1 linked gene
This 198 bp open chromatin element is linked to CHRNA7 and is bound by 31 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CHRNA7 1.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:32,023,993 – 32,034,191
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 198 bp overlap
BRD4 3 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 183 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 198 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 55 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 188 bp overlap
CHD4 2 datasets
ChIP 501-mel GSE134848.CHD4.501-mel 156 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 198 bp overlap
CTCF 132 datasets
ChIP A-549 ENCSR000AUE.CTCF.A-549 198 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 198 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 196 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 165 bp overlap
ChIP A-549 ENCSR000DYD.CTCF.A-549 163 bp overlap
ChIP A-549 ENCSR000BHW.CTCF.A-549 136 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 198 bp overlap
ChIP A549 ENCFF182TCQ 198 bp overlap
ChIP A549 ENCFF434LUY 198 bp overlap
ChIP BE2C ENCFF757SRF 198 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 198 bp overlap
ChIP D721Med ENCFF513FYD 189 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 92 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 146 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 64 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 198 bp overlap
ChIP GM23338 ENCFF531QOI 198 bp overlap
ChIP GM23338 ENCFF772DML 155 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 195 bp overlap
ChIP H1 ENCFF764RHO 174 bp overlap
ChIP H9 ENCFF152GTF 198 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 198 bp overlap
ChIP HAP1 GSE94992.CTCF.HAP1 191 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 198 bp overlap
ChIP HAP1_SCC4KO GSE94992.CTCF.HAP1_SCC4KO 189 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 178 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 198 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 198 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 198 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 198 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 198 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 198 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 198 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 198 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 184 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 140 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 109 bp overlap
ChIP HEK293 ENCFF498RMM 198 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 198 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 189 bp overlap
ChIP HEK293T GSE103651.CTCF.HEK293T 83 bp overlap
ChIP HFF ENCSR000DUM.CTCF.HFF 183 bp overlap
ChIP HSPC-CD34 GSE107147.CTCF.HSPC-CD34 198 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 174 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 198 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 198 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 198 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 76 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 161 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 158 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 198 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 131 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 113 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 108 bp overlap
ChIP HepG2 ENCFF348BUL 174 bp overlap
ChIP IMR-5 GSE78957.CTCF.IMR-5 194 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 172 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 89 bp overlap
ChIP KMS-11_NSD2-High GSE131651.CTCF.KMS-11_NSD2-High 180 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 198 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 198 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 198 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 193 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 198 bp overlap
ChIP MCF-7 ENCFF198DQX 162 bp overlap
ChIP MCF-7 ENCFF424NQR 187 bp overlap
ChIP MCF-7 ENCFF494VXA 162 bp overlap
ChIP MCF-7 ENCFF844STM 187 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 198 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 156 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 198 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 198 bp overlap
ChIP NPC GSE115407.CTCF.NPC 198 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 198 bp overlap
ChIP PANC-1 ENCSR203QEB.CTCF.PANC-1 198 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 165 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 198 bp overlap
ChIP SEM GSE117864.CTCF.SEM 145 bp overlap
ChIP SK-N-SH ENCFF731NJX 198 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 198 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 198 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 198 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 127 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 160 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 105 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 151 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 176 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 160 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 198 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 188 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 177 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 61 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 198 bp overlap
ChIP adrenal-gland ENCSR450BLH.CTCF.adrenal-gland 52 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 185 bp overlap
ChIP brain ENCFF163BBN 188 bp overlap
ChIP brain ENCFF685VRG 198 bp overlap
ChIP chondrocyte ENCFF134ORZ 64 bp overlap
ChIP endodermal cell ENCFF471YCZ 198 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 188 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 143 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 188 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 100 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 198 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 198 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 198 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 198 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 183 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 191 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 198 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 168 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 198 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 187 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 171 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 198 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 198 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 189 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 102 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 198 bp overlap
ChIP leukemia_CEBPA-168h GSE142161.CTCF.leukemia_CEBPA-168h 156 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 198 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 198 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 160 bp overlap
ChIP neuroblastoma GSE115862.CTCF.neuroblastoma 198 bp overlap
ChIP neuron GSE115407.CTCF.neuron 198 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 187 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 188 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 131 bp overlap
ChIP retina_AB1-RB GSE86981.CTCF.retina_AB1-RB 198 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 198 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 159 bp overlap
EBF1 1 dataset
ChIP NALM-6 GSE126300.EBF1.NALM-6 198 bp overlap
EZH2 8 datasets
ChIP DU145_SH4 GSE135623.EZH2.DU145_SH4 91 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 114 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 97 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 198 bp overlap
ChIP astrocyte ENCFF365JTP 198 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 132 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 198 bp overlap
ChIP neural progenitor cell ENCFF472NFV 158 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 154 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 190 bp overlap
MYCN 3 datasets
ChIP CHP-134 GSE129588.MYCN.CHP-134 109 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 176 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 198 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 198 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 198 bp overlap
PHIP 1 dataset
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 198 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 198 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 137 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 152 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 198 bp overlap
RAD21 12 datasets
ChIP H1 ENCFF698EWO 198 bp overlap
ChIP H1 ENCFF967OJF 198 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 198 bp overlap
ChIP SK-N-SH ENCFF747MAS 198 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 198 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 198 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 198 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 146 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 153 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 148 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 184 bp overlap
ChIP neuroblastoma GSE115862.RAD21.neuroblastoma 189 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 146 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 158 bp overlap
SIN3A 2 datasets
ChIP H1 ENCFF042ZSL 198 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 198 bp overlap
SMC1A-B 1 dataset
ChIP Kelly_shLUC-res GSE115248.SMC1A-B.Kelly_shLUC-res 198 bp overlap
SMC3 4 datasets
ChIP SK-N-SH ENCFF791WFB 198 bp overlap
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 197 bp overlap
ChIP hESC_D0 GSE116862.SMC3.hESC_D0 163 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 129 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 97 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 198 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 68 bp overlap
ZBTB48 1 dataset
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 175 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 127 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 132 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 198 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 85 bp overlap
ZNF692 1 dataset
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 140 bp overlap
ZNF777 1 dataset
ChIP HEK293 ENCFF569SYP 67 bp overlap
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