chr1 : 226,754,642 226,755,007
365 bp 57 TFs 0 linked genes
This 365 bp open chromatin element has no linked target genes and is bound by 57 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:226,749,642 – 226,760,007
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
57 transcription factors
Source
Cell type
BCL11A 1 dataset
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 61 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 250 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 156 bp overlap
ChIP K562 ENCFF673OEZ 242 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 194 bp overlap
Crx 1 dataset
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 365 bp overlap
E2F6 3 datasets
ChIP K-562 ENCSR000EWJ.E2F6.K-562 149 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 138 bp overlap
ChIP K562 ENCFF136LTS 110 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 200 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 229 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 284 bp overlap
ChIP DE DE-FOXA2-2 283 bp overlap
FOXN3 1 dataset
Motif DE_72h DE_72h-FOXN3_MA1489.1 8 bp overlap
Foxq1 1 dataset
Motif DE_72h DE_72h-Foxq1_MA0040.2 10 bp overlap
GATA1 13 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 165 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 120 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 69 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 297 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 201 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 302 bp overlap
ChIP erythroblast ENCFF867JAR 323 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 340 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 175 bp overlap
ChIP erythroid-progenitor_EPrec GSE124163.GATA1.erythroid-progenitor_EPrec 152 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 239 bp overlap
ChIP erythroid_Don002 GSE137982.GATA1.erythroid_Don002 149 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 216 bp overlap
GATA2 2 datasets
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 204 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 206 bp overlap
GATA3 1 dataset
ChIP thymocyte GSE71751.GATA3.thymocyte 153 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 365 bp overlap
ChIP DE DE-GATA4-2 365 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 365 bp overlap
ChIP DE DE-GATA6-2 365 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 365 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 365 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 365 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 365 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 317 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 342 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 365 bp overlap
GSC 1 dataset
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 306 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 297 bp overlap
KLF1 2 datasets
ChIP HUDEP-2_S2 GSE97671.KLF1.HUDEP-2_S2 193 bp overlap
ChIP HUDEP-2_S4 GSE97671.KLF1.HUDEP-2_S4 131 bp overlap
KLF5 1 dataset
ChIP HEK293 GSE88976.KLF5.HEK293 155 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 172 bp overlap
ChIP K562 ENCFF320EQC 145 bp overlap
MAX 1 dataset
ChIP K562 ENCFF524IJO 125 bp overlap
MGA 2 datasets
ChIP K-562 ENCSR710WLO.MGA.K-562 117 bp overlap
ChIP K562 ENCFF140CEX 290 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 94 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 150 bp overlap
OTX1 1 dataset
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_72h DE_72h-OTX2_MA0712.3 7 bp overlap
PITX1 1 dataset
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
POLR2A 1 dataset
ChIP erythroblast ENCFF498VMR 365 bp overlap
RHOXF1 1 dataset
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
RNF2 2 datasets
ChIP K-562 ENCSR138FUZ.RNF2.K-562 87 bp overlap
ChIP K562 ENCFF653BQJ 181 bp overlap
SCRT1 1 dataset
Motif DE_72h DE_72h-SCRT1_MA0743.3 10 bp overlap
SCRT2 3 datasets
Motif DE_72h DE_72h-SCRT2_MA0744.3 10 bp overlap
ChIP HEK293 ENCFF711QQB 314 bp overlap
ChIP HEK293 ENCFF711QQB 365 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 365 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 281 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 327 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 365 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 137 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 233 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 63 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 338 bp overlap
TAL1 5 datasets
ChIP CD34 GSE52924.TAL1.CD34 150 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 111 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 118 bp overlap
ChIP K562 ENCFF661CCK 193 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 125 bp overlap
ZNF121 1 dataset
ChIP HEK293 ENCFF839FUF 90 bp overlap
ZNF135 1 dataset
Motif DE_72h DE_72h-ZNF135_MA1587.1 14 bp overlap
ZNF143 1 dataset
Motif DE_72h DE_72h-ZNF143_MA0088.2 16 bp overlap
ZNF460 1 dataset
Motif DE_72h DE_72h-ZNF460_MA1596.1 16 bp overlap
Zfp809 1 dataset
Motif DE_72h DE_72h-Zfp809_MA2125.1 9 bp overlap