chr1 : 25,074,002 25,074,336
334 bp 43 TFs 0 linked genes
This 334 bp open chromatin element has no linked target genes and is bound by 43 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:25,069,002 – 25,079,336
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 283 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF031ISE 113 bp overlap
ChIP BLaER1 ENCFF262VBH 114 bp overlap
ChIP BLaER1 ENCFF335XTP 98 bp overlap
ChIP BLaER1 ENCFF364PUR 253 bp overlap
DACH1 1 dataset
ChIP K-562 ENCSR030TJP.DACH1.K-562 178 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 158 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 234 bp overlap
ESRRA 2 datasets
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 184 bp overlap
ChIP K562 ENCFF968PEP 246 bp overlap
FLI1 5 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 87 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 52 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 53 bp overlap
ChIP SK-N-MC_SHGFP_48H GSE61944.FLI1.SK-N-MC_SHGFP_48H 73 bp overlap
ChIP SK-N-MC_SHGFP_96H GSE61944.FLI1.SK-N-MC_SHGFP_96H 109 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 204 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 325 bp overlap
ChIP DE DE-FOXA2-2 316 bp overlap
GATA1 1 dataset
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 202 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000DKA.GATA2.K-562 140 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 334 bp overlap
ChIP DE DE-GATA4-2 324 bp overlap
ChIP foregut GSE117136.GATA4.foregut 297 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 270 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 334 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 326 bp overlap
ChIP DE DE-GATA6-2 327 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 263 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 294 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 319 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 296 bp overlap
ChIP foregut GSE117136.GATA6.foregut 334 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 318 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 156 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 325 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 111 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 292 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 334 bp overlap
ChIP K562 ENCFF320EQC 334 bp overlap
MAFF 3 datasets
ChIP HepG2 ENCFF452YUT 164 bp overlap
ChIP K-562 ENCSR000EGI.MAFF.K-562 97 bp overlap
ChIP K562 ENCFF071YKK 155 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 228 bp overlap
ChIP K562 ENCFF455EEO 254 bp overlap
MAFK 4 datasets
ChIP A549 ENCFF371EPR 203 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 91 bp overlap
ChIP HepG2 ENCFF743ZOF 136 bp overlap
ChIP IMR-90 ENCFF336DHZ 155 bp overlap
MAX 1 dataset
ChIP K-562 ENCSR000EFV.MAX.K-562 227 bp overlap
MGA 2 datasets
ChIP K-562 ENCSR710WLO.MGA.K-562 283 bp overlap
ChIP K562 ENCFF140CEX 334 bp overlap
MITF 1 dataset
ChIP K-562 ENCSR797SWM.MITF.K-562 180 bp overlap
NR2C2 1 dataset
ChIP K562 ENCFF750AXF 334 bp overlap
ONECUT1 3 datasets
ChIP H9 ERP004206.ONECUT1.H9 227 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 138 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 334 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 240 bp overlap
POLR2A 1 dataset
ChIP SK-N-MC ENCFF088IVG 124 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 159 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 246 bp overlap
SMARCA2 2 datasets
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCA2.SK-N-MC_shEWSFLI1 69 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCA2.SK-N-MC_shGFP 169 bp overlap
SMARCC1 2 datasets
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 137 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 81 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 253 bp overlap
TARDBP 1 dataset
ChIP K-562 GSE120104.TARDBP.K-562 298 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 334 bp overlap
UBTF 1 dataset
ChIP K-562 ENCSR000EFZ.UBTF.K-562 123 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 237 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 154 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 90 bp overlap
ZFX 3 datasets
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 174 bp overlap
ChIP K-562 ENCSR920ASP.ZFX.K-562 60 bp overlap
ChIP K562 ENCFF169LZT 288 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 223 bp overlap
ZNF512 1 dataset
ChIP K562 ENCFF601EMZ 111 bp overlap