chr13 : 94,218,449 94,218,909
460 bp 46 TFs 0 linked genes
This 460 bp open chromatin element has no linked target genes and is bound by 46 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:94,213,449 – 94,223,909
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 400 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 260 bp overlap
BRD4 2 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 225 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 327 bp overlap
CEBPD 1 dataset
Motif ES_0h ES_0h-CEBPD_MA0836.3 8 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 447 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 150 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 254 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 337 bp overlap
FEZF2 1 dataset
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 223 bp overlap
HLF 1 dataset
Motif ES_0h ES_0h-HLF_MA0043.4 9 bp overlap
Hnf1A 1 dataset
Motif ES_0h ES_0h-Hnf1A_MA1991.2 10 bp overlap
Lef1 1 dataset
Motif ES_0h ES_0h-Lef1_MA0768.3 8 bp overlap
MYB 1 dataset
ChIP DU528 GSE94000.MYB.DU528 63 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 294 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 160 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 455 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 373 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 148 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 376 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 445 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 324 bp overlap
ChIP hESC GSE20650.NANOG.hESC 180 bp overlap
ChIP hESC GSE18292.NANOG.hESC 194 bp overlap
NFIL3 1 dataset
Motif ES_0h ES_0h-NFIL3_MA0025.3 9 bp overlap
NR1D1 1 dataset
Motif ES_0h ES_0h-NR1D1_MA1531.2 14 bp overlap
POU1F1 1 dataset
Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU5F1 12 datasets
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
ChIP GM23338 ENCFF333SNB 294 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 411 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 276 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 460 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 206 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 282 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 254 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 161 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 349 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 358 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 215 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 332 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 305 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 287 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 242 bp overlap
RELB 1 dataset
Motif ES_0h ES_0h-RELB_MA1117.2 7 bp overlap
Rhox11 1 dataset
Motif ES_0h ES_0h-Rhox11_MA0629.2 9 bp overlap
SETDB1 1 dataset
ChIP WN8532 GSE36579.SETDB1.WN8532 173 bp overlap
SMARCA4 2 datasets
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 145 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 310 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 344 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 226 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 340 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 247 bp overlap
ChIP hESC GSE18292.SOX2.hESC 107 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 331 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 264 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 116 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 290 bp overlap
TCF7 1 dataset
Motif ES_0h ES_0h-TCF7_MA0769.3 7 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 460 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 230 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 174 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 200 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 301 bp overlap