chr13 : 92,559,245 92,559,857
612 bp 39 TFs 0 linked genes
This 612 bp open chromatin element has no linked target genes and is bound by 39 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:92,554,245 – 92,564,857
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP K562 ENCFF611FFO 70 bp overlap
BRD2 1 dataset
ChIP K-562_IBET151_500nM GSE120715.BRD2.K-562_IBET151_500nM 153 bp overlap
BRD3 1 dataset
ChIP K-562_IBET151_50nM GSE120715.BRD3.K-562_IBET151_50nM 178 bp overlap
BRD4 2 datasets
ChIP K-562_DMSO GSE120715.BRD4.K-562_DMSO 162 bp overlap
ChIP K-562_IBET151_50nM GSE120715.BRD4.K-562_IBET151_50nM 137 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 310 bp overlap
Dux 1 dataset
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
FOS 1 dataset
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
FOXJ3 1 dataset
ChIP K562 ENCFF605HNH 246 bp overlap
GATA1::TAL1 2 datasets
Motif DE_12h DE_12h-GATA1TAL1_MA0140.3 17 bp overlap
Motif ES_0h ES_0h-GATA1TAL1_MA0140.3 17 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
IRF2 1 dataset
Motif DE_12h DE_12h-IRF2_MA0051.2 16 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 259 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
POU1F1 1 dataset
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
POU2F2 1 dataset
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 297 bp overlap
REST 33 datasets
ChIP A-549 ENCSR892DRK.REST.A-549 165 bp overlap
ChIP GM12878 ENCSR000BGF.REST.GM12878 70 bp overlap
ChIP GM12878 ENCSR000BQS.REST.GM12878 137 bp overlap
ChIP GM23338 ENCFF024TCL 184 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 112 bp overlap
ChIP H1 ENCFF203SWY 126 bp overlap
ChIP H1 ENCFF429RUE 153 bp overlap
ChIP HEK293 ENCFF073DOT 218 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 239 bp overlap
ChIP HL-60 ENCFF589LOF 238 bp overlap
ChIP HL-60 ENCSR000BTF.REST.HL-60 101 bp overlap
ChIP HeLa-S3 ENCFF911DTC 164 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 145 bp overlap
ChIP Ishikawa ENCFF456OHV 242 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 153 bp overlap
ChIP K-562 ENCSR000ATM.REST.K-562 291 bp overlap
ChIP K-562 ENCSR137ZMQ.REST.K-562 151 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 132 bp overlap
ChIP K562 ENCFF430APM 173 bp overlap
ChIP K562 ENCFF688UKW 251 bp overlap
ChIP LNCaP GSE119385.REST.LNCaP 308 bp overlap
ChIP MCF-7 ENCFF893RRD 128 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 136 bp overlap
ChIP PFSK-1 ENCFF845VHA 228 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 202 bp overlap
ChIP PFSK1 ENCSR000BJP.REST.PFSK1 97 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 303 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 207 bp overlap
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 151 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 418 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 231 bp overlap
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 179 bp overlap
ChIP hiPSC_IIA11 GSE106870.REST.hiPSC_IIA11 175 bp overlap
SMARCA4 1 dataset
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 427 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 263 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
ZNF143 1 dataset
ChIP K-562 GSE39263.ZNF143.K-562 182 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF157 1 dataset
Motif DE_12h DE_12h-ZNF157_MA2331.1 21 bp overlap
ZNF174 1 dataset
ChIP K562 ENCFF876UWD 201 bp overlap
ZNF277 1 dataset
ChIP K562 ENCFF448PCD 129 bp overlap
ZNF354A 1 dataset
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF549 1 dataset
ChIP HEK293 GSE76494.ZNF549.HEK293 148 bp overlap
ZNF57 1 dataset
ChIP K562 ENCFF527CQA 80 bp overlap
ZNF93 1 dataset
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap