chr13 : 71,786,897 – 71,787,599
702 bp 78 TFs 0 linked genes
This 702 bp open chromatin element has no linked target genes and is bound by 78 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:71,781,897 – 71,792,599
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
78 transcription factors
Source
Cell type
BARX1 3 datasets
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
Motif DE_24h DE_24h-BARX1_MA0875.2 6 bp overlap
Motif DE_36h DE_36h-BARX1_MA0875.2 6 bp overlap
BRCA1 1 dataset
ChIP K-562 ENCSR223MLH.BRCA1.K-562 636 bp overlap
BRD4 5 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 639 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 213 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 192 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 381 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 219 bp overlap
BSX 3 datasets
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
Motif DE_24h DE_24h-BSX_MA0876.2 6 bp overlap
Motif DE_36h DE_36h-BSX_MA0876.2 6 bp overlap
CREBBP 1 dataset
ChIP LS180_125 GSE39277.CREBBP.LS180_125 81 bp overlap
CTCF 4 datasets
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_24h DE_24h-CTCF_MA1929.2 31 bp overlap
Motif DE_36h DE_36h-CTCF_MA1929.2 31 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 188 bp overlap
DLX1 3 datasets
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
Motif DE_24h DE_24h-DLX1_MA0879.3 6 bp overlap
Motif DE_36h DE_36h-DLX1_MA0879.3 6 bp overlap
DLX6 3 datasets
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Motif DE_24h DE_24h-DLX6_MA0882.2 6 bp overlap
Motif DE_36h DE_36h-DLX6_MA0882.2 6 bp overlap
DUX4 3 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif DE_24h DE_24h-DUX4_MA0468.1 11 bp overlap
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Dlx2 3 datasets
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Motif DE_24h DE_24h-Dlx2_MA0885.3 8 bp overlap
Motif DE_36h DE_36h-Dlx2_MA0885.3 8 bp overlap
Dlx3 3 datasets
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Motif DE_24h DE_24h-Dlx3_MA0880.2 6 bp overlap
Motif DE_36h DE_36h-Dlx3_MA0880.2 6 bp overlap
Dlx4 3 datasets
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Motif DE_24h DE_24h-Dlx4_MA0881.2 6 bp overlap
Motif DE_36h DE_36h-Dlx4_MA0881.2 6 bp overlap
Dlx5 3 datasets
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
Motif DE_24h DE_24h-Dlx5_MA1476.3 8 bp overlap
Motif DE_36h DE_36h-Dlx5_MA1476.3 8 bp overlap
E2F6 3 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
Motif DE_24h DE_24h-E2F6_MA0471.3 8 bp overlap
Motif DE_36h DE_36h-E2F6_MA0471.3 8 bp overlap
ESR1 2 datasets
ChIP MCF-7 GSE48930.ESR1.MCF-7 161 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 464 bp overlap
ESR1_pS118 2 datasets
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 576 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1_pS118.MCF-7_Veh_sc 321 bp overlap
EWSR1-FLI1 1 dataset
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
FOXA1 3 datasets
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 193 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 152 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 202 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 316 bp overlap
ChIP DE DE-FOXA2-2 419 bp overlap
FOXN3 1 dataset
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 163 bp overlap
Foxj3 1 dataset
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
Foxq1 1 dataset
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
GATA6 3 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 256 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 290 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 382 bp overlap
GBX2 3 datasets
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
Motif DE_24h DE_24h-GBX2_MA0890.2 6 bp overlap
Motif DE_36h DE_36h-GBX2_MA0890.2 6 bp overlap
HESX1 3 datasets
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
Motif DE_24h DE_24h-HESX1_MA0894.2 6 bp overlap
Motif DE_36h DE_36h-HESX1_MA0894.2 6 bp overlap
HOXA6 3 datasets
Motif DE_12h DE_12h-HOXA6_MA1497.2 7 bp overlap
Motif DE_24h DE_24h-HOXA6_MA1497.2 7 bp overlap
Motif DE_36h DE_36h-HOXA6_MA1497.2 7 bp overlap
HOXA7 3 datasets
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
Motif DE_24h DE_24h-HOXA7_MA1498.3 6 bp overlap
Motif DE_36h DE_36h-HOXA7_MA1498.3 6 bp overlap
HOXB6 3 datasets
Motif DE_12h DE_12h-HOXB6_MA1500.2 7 bp overlap
Motif DE_24h DE_24h-HOXB6_MA1500.2 7 bp overlap
Motif DE_36h DE_36h-HOXB6_MA1500.2 7 bp overlap
HOXB7 3 datasets
Motif DE_12h DE_12h-HOXB7_MA1501.2 7 bp overlap
Motif DE_24h DE_24h-HOXB7_MA1501.2 7 bp overlap
Motif DE_36h DE_36h-HOXB7_MA1501.2 7 bp overlap
HOXB8 3 datasets
Motif DE_12h DE_12h-HOXB8_MA1502.2 7 bp overlap
Motif DE_24h DE_24h-HOXB8_MA1502.2 7 bp overlap
Motif DE_36h DE_36h-HOXB8_MA1502.2 7 bp overlap
HOXD8 3 datasets
Motif DE_12h DE_12h-HOXD8_MA0910.3 7 bp overlap
Motif DE_24h DE_24h-HOXD8_MA0910.3 7 bp overlap
Motif DE_36h DE_36h-HOXD8_MA0910.3 7 bp overlap
Hmx1 3 datasets
Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap
Motif DE_24h DE_24h-Hmx1_MA0896.2 9 bp overlap
Motif DE_36h DE_36h-Hmx1_MA0896.2 9 bp overlap
Hmx3 3 datasets
Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap
Motif DE_24h DE_24h-Hmx3_MA0898.2 9 bp overlap
Motif DE_36h DE_36h-Hmx3_MA0898.2 9 bp overlap
IRF7 3 datasets
Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap
Motif DE_24h DE_24h-IRF7_MA0772.2 13 bp overlap
Motif DE_36h DE_36h-IRF7_MA0772.2 13 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 121 bp overlap
Irf1 3 datasets
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Motif DE_24h DE_24h-Irf1_MA0050.4 11 bp overlap
Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap
KMT2A 4 datasets
ChIP HEK293T_C-term_C49 GSE90762.KMT2A.HEK293T_C-term_C49 300 bp overlap
ChIP HEK293T_C-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_C-term_shCtrl_TASP1-KO 76 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 702 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 702 bp overlap
LBX2 3 datasets
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
Motif DE_24h DE_24h-LBX2_MA0699.2 6 bp overlap
Motif DE_36h DE_36h-LBX2_MA0699.2 6 bp overlap
LHX2 3 datasets
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
Motif DE_24h DE_24h-LHX2_MA0700.3 6 bp overlap
Motif DE_36h DE_36h-LHX2_MA0700.3 6 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 329 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 157 bp overlap
ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 174 bp overlap
MSX1 3 datasets
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
Motif DE_24h DE_24h-MSX1_MA0666.3 6 bp overlap
Motif DE_36h DE_36h-MSX1_MA0666.3 6 bp overlap
MSX2 3 datasets
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Motif DE_24h DE_24h-MSX2_MA0708.3 6 bp overlap
Motif DE_36h DE_36h-MSX2_MA0708.3 6 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 246 bp overlap
Msx3 3 datasets
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
Motif DE_24h DE_24h-Msx3_MA0709.2 6 bp overlap
Motif DE_36h DE_36h-Msx3_MA0709.2 6 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 261 bp overlap
ChIP hESC GSE18292.NANOG.hESC 325 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 296 bp overlap
NUP98-HOXA9 1 dataset
ChIP HEK293-FT GSE62586.NUP98-HOXA9.HEK293-FT 336 bp overlap
Nobox 3 datasets
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
Motif DE_24h DE_24h-Nobox_MA0125.2 6 bp overlap
Motif DE_36h DE_36h-Nobox_MA0125.2 6 bp overlap
PHOX2A 3 datasets
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_24h DE_24h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 4 datasets
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_24h DE_24h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_36h DE_36h-PHOX2B_MA0681.3 12 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 258 bp overlap
POU1F1 3 datasets
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
Motif DE_24h DE_24h-POU1F1_MA0784.3 14 bp overlap
Motif DE_36h DE_36h-POU1F1_MA0784.3 14 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 289 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 147 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 205 bp overlap
PROP1 3 datasets
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
Motif DE_24h DE_24h-PROP1_MA0715.1 11 bp overlap
Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap
PSIP1 2 datasets
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 162 bp overlap
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 111 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 297 bp overlap
RAX 3 datasets
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
Motif DE_24h DE_24h-RAX_MA0718.2 6 bp overlap
Motif DE_36h DE_36h-RAX_MA0718.2 6 bp overlap
RBPJ 3 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_24h DE_24h-RBPJ_MA1116.2 6 bp overlap
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
REST 1 dataset
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 230 bp overlap
SMARCA4 6 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 238 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 274 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 517 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 107 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 332 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 169 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 506 bp overlap
SMARCC1 1 dataset
ChIP hiPSC GSE124903.SMARCC1.hiPSC 243 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 284 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 274 bp overlap
TCF7L2 2 datasets
ChIP HEK293 ENCFF513JQN 505 bp overlap
ChIP HEK293 ENCFF513JQN 350 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF582MWI 648 bp overlap
ZNF18 2 datasets
ChIP HEK293 GSE76494.ZNF18.HEK293 145 bp overlap
ChIP HEK293T GSE78099.ZNF18.HEK293T 320 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 213 bp overlap
ZNF547 1 dataset
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
ZNF561 1 dataset
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 235 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zic1::Zic2 1 dataset
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
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