chr13 : 39,012,712 – 39,012,917
205 bp 37 TFs 0 linked genes
This 205 bp open chromatin element has no linked target genes and is bound by 37 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:39,007,712 – 39,017,917
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 57 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 81 bp overlap
CCAR2 2 datasets
ChIP Hep-G2 ENCSR247XFV.CCAR2.Hep-G2 181 bp overlap
ChIP Hep-G2 GSE120104.CCAR2.Hep-G2 181 bp overlap
CEBPB 1 dataset
ChIP WA01 ENCSR000EBV.CEBPB.WA01 92 bp overlap
CHD8 1 dataset
ChIP T-47D GSE62428.CHD8.T-47D 58 bp overlap
CREB1 2 datasets
ChIP H1 ENCFF955PMP 205 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 165 bp overlap
CTCF 354 datasets
ChIP 22Rv1 ENCFF466OXN 205 bp overlap
ChIP 22Rv1 ENCFF466OXN 205 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 205 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 205 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 205 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 205 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 205 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 205 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 205 bp overlap
ChIP A-549 ENCSR000DYD.CTCF.A-549 118 bp overlap
ChIP A-549 ENCSR000BHV.CTCF.A-549 135 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 205 bp overlap
ChIP A549 ENCFF034FVO 205 bp overlap
ChIP A549 ENCFF182TCQ 194 bp overlap
ChIP A549 ENCFF434LUY 205 bp overlap
ChIP A549 ENCFF669BWC 205 bp overlap
ChIP A673 ENCFF123WOM 204 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 182 bp overlap
ChIP BE2C ENCFF757SRF 205 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 205 bp overlap
ChIP BJ ENCFF434HEC 205 bp overlap
ChIP BJ ENCSR000DQI.CTCF.BJ 205 bp overlap
ChIP C4-2B ENCFF821XVN 205 bp overlap
ChIP Caco-2 ENCFF753NZV 205 bp overlap
ChIP Caco-2 ENCFF934QYS 205 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 143 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 205 bp overlap
ChIP D721Med ENCFF513FYD 203 bp overlap
ChIP DND-41 ENCFF913MRA 205 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 205 bp overlap
ChIP DOHH2 ENCFF637WNW 205 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 205 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 193 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 205 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 205 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 205 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 201 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 202 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 205 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 98 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 138 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 129 bp overlap
ChIP GM12878 ENCFF217EAX 172 bp overlap
ChIP GM12878 ENCFF485TGR 193 bp overlap
ChIP GM12878 ENCFF511URZ 195 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 181 bp overlap
ChIP GM23338 ENCFF531QOI 205 bp overlap
ChIP GM23338 ENCFF772DML 192 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 205 bp overlap
ChIP GP5D_SIRAD21 GSE51234.CTCF.GP5D_SIRAD21 205 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 200 bp overlap
ChIP H1 ENCFF230QSV 92 bp overlap
ChIP H1 ENCFF414GZI 199 bp overlap
ChIP H1 ENCFF764RHO 205 bp overlap
ChIP H54 ENCFF255TVO 204 bp overlap
ChIP H9 ENCFF152GTF 205 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 205 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 205 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 205 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 173 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 205 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 205 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 205 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 205 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 205 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 205 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 202 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 205 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 205 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 164 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 205 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 205 bp overlap
ChIP HCT116 ENCFF003KHP 205 bp overlap
ChIP HCT116 ENCFF209YMI 205 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.CTCF.HEC-1-B_F-insertion 121 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 78 bp overlap
ChIP HEC-1-B_RF-mutation GSE140868.CTCF.HEC-1-B_RF-mutation 94 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 131 bp overlap
ChIP HEK293 ENCFF498RMM 205 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 205 bp overlap
ChIP HFF-Myc ENCFF680WYR 205 bp overlap
ChIP HFFc6 ENCFF005CJI 205 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 177 bp overlap
ChIP HL-60 ERP008568.CTCF.HL-60 163 bp overlap
ChIP HMS001 GSE143026.CTCF.HMS001 121 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 205 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 205 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 205 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 178 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 178 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 200 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 191 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 168 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 205 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 78 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCFF626XQK 205 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 205 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 189 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 108 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 198 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 205 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 205 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 184 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 173 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 197 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 205 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 205 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 205 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 191 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 161 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 164 bp overlap
ChIP HepG2 ENCFF127KUP 205 bp overlap
ChIP HepG2 ENCFF194VBQ 205 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP HepG2 ENCFF757EKU 205 bp overlap
ChIP IMR-5 GSE78957.CTCF.IMR-5 119 bp overlap
ChIP IMR-90 ENCFF887MRH 188 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 138 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 205 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 162 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 147 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 153 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 109 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 149 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 135 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 123 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 128 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 142 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 113 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 155 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 126 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 136 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 205 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 141 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 203 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 86 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 205 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 205 bp overlap
ChIP KB_5Z GSE134435.CTCF.KB_5Z 136 bp overlap
ChIP KB_IL-1_5Z GSE134435.CTCF.KB_IL-1_5Z 147 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 205 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 181 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 205 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 138 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 185 bp overlap
ChIP LNCAP ENCFF223HIG 205 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 186 bp overlap
ChIP LNCaP ENCSR000DME.CTCF.LNCaP 103 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 205 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 205 bp overlap
ChIP Loucy ENCFF359TVQ 136 bp overlap
ChIP Loucy ENCFF359TVQ 154 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 205 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 205 bp overlap
ChIP MCF-10A ERP000783.CTCF.MCF-10A 139 bp overlap
ChIP MCF-7 ENCFF139NQI 205 bp overlap
ChIP MCF-7 ENCFF162GNE 205 bp overlap
ChIP MCF-7 ENCFF198DQX 125 bp overlap
ChIP MCF-7 ENCFF210JUZ 180 bp overlap
ChIP MCF-7 ENCFF210JUZ 130 bp overlap
ChIP MCF-7 ENCFF414SZG 167 bp overlap
ChIP MCF-7 ENCFF424NQR 173 bp overlap
ChIP MCF-7 ENCFF494VXA 125 bp overlap
ChIP MCF-7 ENCFF844STM 168 bp overlap
ChIP MCF-7 ENCFF954TUV 160 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 205 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 205 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 205 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 205 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 205 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 176 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 165 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 205 bp overlap
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 205 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 205 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 205 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 205 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 205 bp overlap
ChIP MCF-7L_t4 GSE108787.CTCF.MCF-7L_t4 205 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 205 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 205 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 205 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 185 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 170 bp overlap
ChIP MCF-7_tamoxifen-resistant GSE118711.CTCF.MCF-7_tamoxifen-resistant 205 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 205 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 138 bp overlap
ChIP NB4 ENCFF155DNY 191 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 175 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 205 bp overlap
ChIP OCI-LY1 ENCFF455ESK 205 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 130 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 191 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 205 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 205 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 205 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 205 bp overlap
ChIP PC-3 ENCFF487TUI 123 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 205 bp overlap
ChIP Panc1 ENCFF056JQX 205 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 205 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 205 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 180 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 140 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 153 bp overlap
ChIP SK-N-SH ENCFF575DMG 205 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 191 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 158 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 140 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 181 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 205 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 205 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 145 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 205 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 143 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 205 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 200 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 205 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 180 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 168 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 205 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 204 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 205 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 203 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 205 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 203 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 205 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 205 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 205 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 205 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 180 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 164 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 205 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 205 bp overlap
ChIP VCaP ENCFF858YQT 205 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 205 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 141 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 152 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 205 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 188 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 175 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 205 bp overlap
ChIP WA09_heat-shock GSE105028.CTCF.WA09_heat-shock 161 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 201 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 142 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 106 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 137 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 205 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 198 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 192 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 150 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 205 bp overlap
ChIP brain ENCFF685VRG 205 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 205 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 205 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 205 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 205 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 153 bp overlap
ChIP chondrocyte ENCFF134ORZ 205 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 171 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 194 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 197 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 205 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 190 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 205 bp overlap
ChIP endodermal cell ENCFF471YCZ 205 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 195 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 205 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 147 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ALA.CTCF.endothelial_umbilical-vein 176 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DLW.CTCF.endothelial_umbilical-vein 162 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 205 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 205 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 205 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 164 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 205 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 205 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 152 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 205 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 204 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 192 bp overlap
ChIP erythroid_Don002 GSE137982.CTCF.erythroid_Don002 183 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 205 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 205 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 205 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 205 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 113 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DUH.CTCF.fibroblast_FORESKIN 142 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 138 bp overlap
ChIP fibroblast_LUNG ENCSR000ANO.CTCF.fibroblast_LUNG 143 bp overlap
ChIP fibroblast_LUNG ENCSR000DPM.CTCF.fibroblast_LUNG 121 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 205 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 147 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 195 bp overlap
ChIP hESC GSE20650.CTCF.hESC 114 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 205 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 205 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 205 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 205 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 176 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 205 bp overlap
ChIP hESC_PRIMED GSE69646.CTCF.hESC_PRIMED 205 bp overlap
ChIP heart left ventricle ENCFF548XHH 205 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 205 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 139 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 205 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 205 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 169 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 195 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 205 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 205 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 194 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 205 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 205 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 189 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 205 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 195 bp overlap
ChIP keratinocyte ENCFF046PBT 178 bp overlap
ChIP keratinocyte ENCFF291YDC 178 bp overlap
ChIP keratinocyte ENCFF805QIE 205 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 205 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 205 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 205 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 145 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 205 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 205 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 205 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 205 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 162 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 152 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 205 bp overlap
ChIP neural crest cell ENCFF182LWK 205 bp overlap
ChIP neural progenitor cell ENCFF420RBO 205 bp overlap
ChIP neural progenitor cell ENCFF581WPG 205 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 205 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 204 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 191 bp overlap
ChIP osteocyte ENCFF929FPD 205 bp overlap
ChIP placenta ENCFF029PHY 205 bp overlap
ChIP plasmablast GSE142493.CTCF.plasmablast 205 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 205 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 178 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 205 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 178 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 205 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 205 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 205 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 205 bp overlap
ChIP right lobe of liver ENCFF011NDG 205 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 194 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 205 bp overlap
CTCFL 4 datasets
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 204 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCFL.Kelly_resistant_JQ1 170 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 201 bp overlap
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 180 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 178 bp overlap
ESR1 11 datasets
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 183 bp overlap
ChIP MCF-7 GSE119057.ESR1.MCF-7 205 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 205 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 205 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 205 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 205 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 205 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 205 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 205 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 205 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 205 bp overlap
ETS1 4 datasets
ChIP HUVEC-C_1h GSE93030.ETS1.HUVEC-C_1h 133 bp overlap
ChIP HUVEC-C_VEGF_1H GSE41166.ETS1.HUVEC-C_VEGF_1H 200 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.ETS1.HUVEC-C_VEGF_1h 133 bp overlap
ChIP SCC-25 GSE109884.ETS1.SCC-25 155 bp overlap
FOXO1-PAX3 1 dataset
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 169 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 203 bp overlap
IFNA1 1 dataset
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 179 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 205 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 122 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 165 bp overlap
RAD21 31 datasets
ChIP GP5D GSE51234.RAD21.GP5D 205 bp overlap
ChIP H1 ENCFF698EWO 167 bp overlap
ChIP H1 ENCFF967OJF 130 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 205 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 205 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 165 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 194 bp overlap
ChIP Hep-G2 ERP000209.RAD21.Hep-G2 155 bp overlap
ChIP HepG2 ENCFF906QIS 205 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 142 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 112 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 120 bp overlap
ChIP MCF-7 ENCFF694KOM 205 bp overlap
ChIP MCF-7 ENCFF724VCQ 205 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 199 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 156 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 204 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 183 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 132 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 163 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 205 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 205 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 205 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 186 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 195 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 205 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 205 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 205 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 205 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 205 bp overlap
ChIP liver ENCFF522JHE 205 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 205 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 199 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 205 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 145 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 145 bp overlap
SMC1 2 datasets
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 205 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 204 bp overlap
SMC1A 1 dataset
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 173 bp overlap
SMC1A-B 1 dataset
ChIP TC-32 GSE115250.SMC1A-B.TC-32 165 bp overlap
SMC3 5 datasets
ChIP GP5D GSE51234.SMC3.GP5D 205 bp overlap
ChIP HeLa GSE126990.SMC3.HeLa 140 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 140 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 140 bp overlap
ChIP hESC_D0 GSE116862.SMC3.hESC_D0 180 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 179 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 119 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 202 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 141 bp overlap
SPI1 1 dataset
ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 186 bp overlap
STAG1 5 datasets
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 204 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 188 bp overlap
ChIP HepG2 ENCFF843EBZ 205 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 205 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 194 bp overlap
TEAD4 2 datasets
ChIP H1 ENCFF778PAX 205 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 189 bp overlap
ZBTB2 1 dataset
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 186 bp overlap
ZNF143 3 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 157 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 174 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 179 bp overlap
ZNF263 2 datasets
ChIP HEK293 ENCFF336CWQ 205 bp overlap
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 144 bp overlap
ZNF441 1 dataset
ChIP HEK293T GSE78099.ZNF441.HEK293T 113 bp overlap
Huangfu Lab · Publications · Resources · Contact