chr12 : 101,594,781 101,595,081
300 bp 40 TFs 1 linked gene
This 300 bp open chromatin element is linked to MYBPC1 and is bound by 40 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
MYBPC1 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:101,589,781 – 101,600,081
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
BRD4 6 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 181 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 300 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 251 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 205 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 247 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 278 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 234 bp overlap
CHD8 1 dataset
ChIP T-47D_R5020_5 GSE62428.CHD8.T-47D_R5020_5 176 bp overlap
CTCF 46 datasets
ChIP A549 ENCFF034FVO 190 bp overlap
ChIP A549 ENCFF034FVO 241 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 183 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 103 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 101 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 130 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 246 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 137 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 180 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 231 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 137 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 191 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 224 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 245 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 300 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 273 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 90 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 300 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 204 bp overlap
ChIP endodermal cell ENCFF471YCZ 300 bp overlap
ChIP endodermal cell ENCFF471YCZ 117 bp overlap
ChIP esophagus muscularis mucosa ENCFF182PYY 214 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR074SFL.CTCF.esophagus_muscularis-mucosa 255 bp overlap
ChIP gastrocnemius medialis ENCFF071DIF 181 bp overlap
ChIP gastrocnemius medialis ENCFF071DIF 117 bp overlap
ChIP gastrocnemius medialis ENCFF291LAG 253 bp overlap
ChIP gastrocnemius medialis ENCFF307PRR 187 bp overlap
ChIP gastrocnemius medialis ENCFF307PRR 290 bp overlap
ChIP gastrocnemius medialis ENCFF410RHW 207 bp overlap
ChIP gastrocnemius medialis ENCFF468QWC 99 bp overlap
ChIP gastrocnemius-medialis ENCSR428BKN.CTCF.gastrocnemius-medialis 300 bp overlap
ChIP gastrocnemius-medialis ENCSR594NSU.CTCF.gastrocnemius-medialis 300 bp overlap
ChIP gastrocnemius-medialis ENCSR355ALW.CTCF.gastrocnemius-medialis 300 bp overlap
ChIP gastrocnemius-medialis ENCSR071XWO.CTCF.gastrocnemius-medialis 300 bp overlap
ChIP gastrocnemius-medialis ENCSR998NQG.CTCF.gastrocnemius-medialis 300 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 300 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 296 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 129 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 146 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 154 bp overlap
ChIP myotube ENCFF981UHL 207 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 155 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 300 bp overlap
ChIP neural cell ENCFF335ADI 300 bp overlap
ChIP psoas muscle ENCFF305ZVF 162 bp overlap
ChIP spleen ENCSR595BPR.CTCF.spleen 55 bp overlap
CTCF_s 1 dataset
ChIP HeLa-S3_biotin GSE108869.CTCF_s.HeLa-S3_biotin 300 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 201 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 157 bp overlap
EP300 1 dataset
ChIP neural cell ENCFF442QNK 300 bp overlap
ESR1 7 datasets
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 243 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 300 bp overlap
ChIP MCF-7_jc5854 GSE126004.ESR1.MCF-7_jc5854 187 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 221 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 206 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 281 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 227 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 209 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 200 bp overlap
GATA3 1 dataset
ChIP MCF-7 GSE122847.GATA3.MCF-7 85 bp overlap
HNF4A 1 dataset
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 176 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 133 bp overlap
MEIS1 1 dataset
ChIP SEM GSE38339.MEIS1.SEM 205 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 300 bp overlap
ChIP K562 ENCFF320GSD 273 bp overlap
MYOD1 2 datasets
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 253 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 225 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 300 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHG.NR3C1.A-549 120 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 297 bp overlap
ChIP K562 ENCFF286KMN 300 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 300 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 300 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 300 bp overlap
PKNOX1 6 datasets
ChIP GM12878 ENCFF589FCY 300 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 266 bp overlap
ChIP HEK293T ENCFF174WDB 186 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 287 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 234 bp overlap
ChIP K562 ENCFF236IUS 300 bp overlap
POLR2A 3 datasets
ChIP esophagus muscularis mucosa ENCFF617PTB 207 bp overlap
ChIP gastrocnemius medialis ENCFF081DTE 300 bp overlap
ChIP gastrocnemius medialis ENCFF145VIB 300 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 300 bp overlap
RAD21 1 dataset
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 138 bp overlap
RELA 1 dataset
ChIP BJAB GSE117250.RELA.BJAB 206 bp overlap
SETX 1 dataset
ChIP A-549_Influenza_PR8_NS1 GSE52936.SETX.A-549_Influenza_PR8_NS1 94 bp overlap
SMARCA4 4 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 252 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 300 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 257 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 230 bp overlap
SMC1A 1 dataset
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 168 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 232 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 205 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 267 bp overlap
TBP 4 datasets
ChIP K-562 GSE55306.TBP.K-562 175 bp overlap
ChIP hESC GSE122298.TBP.hESC 170 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 154 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 182 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 236 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 300 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 149 bp overlap
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 145 bp overlap
ZNF573 1 dataset
ChIP HEK293T GSE78099.ZNF573.HEK293T 183 bp overlap
ZNF766 1 dataset
ChIP HEK293T GSE78099.ZNF766.HEK293T 204 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 147 bp overlap