chr12 : 40,107,069 40,107,294
225 bp 35 TFs 1 linked gene
This 225 bp open chromatin element is linked to SLC2A13 and is bound by 35 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SLC2A13 988 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:40,102,069 – 40,112,294
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
ARID1A 3 datasets
ChIP MCF-7 GSE123284.ARID1A.MCF-7 64 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 225 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 225 bp overlap
COMMD3-BMI1,BMI1 1 dataset
ChIP GM12878 ENCFF249AMT 127 bp overlap
CTCF 24 datasets
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 225 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 225 bp overlap
ChIP C4-2B ENCFF821XVN 95 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 225 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 63 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 62 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 100 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 82 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 111 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 225 bp overlap
ChIP RWPE2 ENCFF911IEE 76 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 109 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 225 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 69 bp overlap
ChIP artery_tibial ENCSR699BEK.CTCF.artery_tibial 75 bp overlap
ChIP chondrocyte ENCFF134ORZ 67 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 73 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 94 bp overlap
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 85 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 68 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 122 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 74 bp overlap
ChIP peripheral-blood-neutrophil_US-1 GSE126755.CTCF.peripheral-blood-neutrophil_US-1 63 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 225 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 197 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 204 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 81 bp overlap
FOXA1 1 dataset
ChIP primary-breast-cancer_B1_DSG GSE114737.FOXA1.primary-breast-cancer_B1_DSG 79 bp overlap
GATA2 1 dataset
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 96 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 225 bp overlap
ChIP foregut GSE117136.GATA4.foregut 167 bp overlap
GATA6 1 dataset
ChIP DE_D2 S55-DE-d2-GATA6-exp2 126 bp overlap
HDAC2 1 dataset
ChIP GM12878 ENCSR330OEO.HDAC2.GM12878 56 bp overlap
HOXB13 1 dataset
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 72 bp overlap
IRF1 1 dataset
ChIP K562 ENCFF277KTJ 72 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 121 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 219 bp overlap
MYC 1 dataset
ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 99 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 155 bp overlap
NR2F2 2 datasets
ChIP liver ENCSR168SMX.NR2F2.liver 72 bp overlap
ChIP uterus_STROMA_ENDOMETRIUM GSE52008.NR2F2.uterus_STROMA_ENDOMETRIUM 105 bp overlap
PHIP 2 datasets
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 88 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 225 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 116 bp overlap
RAD21 4 datasets
ChIP HCT-116 GSE121355.RAD21.HCT-116 96 bp overlap
ChIP HEK293_siE1A-TAZ GSE130135.RAD21.HEK293_siE1A-TAZ 225 bp overlap
ChIP HEK293_siYAP GSE130135.RAD21.HEK293_siYAP 225 bp overlap
ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 225 bp overlap
RNF2 1 dataset
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 58 bp overlap
SMARCA4 1 dataset
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 99 bp overlap
STAT3 4 datasets
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 94 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 59 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 95 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 76 bp overlap
TFAP2C 1 dataset
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 67 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF265CEM 225 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 225 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 73 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 166 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 225 bp overlap
ChIP K562 ENCFF875HLX 225 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 225 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 170 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 225 bp overlap
ZNF770 5 datasets
ChIP HEK293 ENCFF468FCG 225 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 225 bp overlap
ChIP HEK293 GSE76494.ZNF770.HEK293 216 bp overlap
ChIP Hep-G2 ENCSR510GKB.ZNF770.Hep-G2 186 bp overlap
ChIP HepG2 ENCFF233UVH 225 bp overlap
ZNF850 1 dataset
ChIP HepG2 ENCFF671RTH 178 bp overlap