chr11 : 125,505,583 125,506,532
949 bp 40 TFs 4 linked genes
This 949 bp open chromatin element is linked to 4 target genes and is bound by 40 transcription factors.
Linked Genes
4 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
FEZ1 9.3 kb Proximal Proximity
EI24 63.5 kb Distal Multiome
STT3A 86.9 kb Distal Multiome
CHEK1 120.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:125,500,583 – 125,511,532
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
AR 5 datasets
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 147 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 194 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 269 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 220 bp overlap
ChIP breast_tumor_Male_28 GSE104399.AR.breast_tumor_Male_28 219 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 201 bp overlap
BRD4 1 dataset
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 295 bp overlap
CTCF 2 datasets
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 472 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 303 bp overlap
EGR1 1 dataset
ChIP macrophage_D3 GSE136216.EGR1.macrophage_D3 267 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 580 bp overlap
ESR1 3 datasets
ChIP T-47D-B_E2 GSE80358.ESR1.T-47D-B_E2 299 bp overlap
ChIP T-47D-B_E2_R5020 GSE80358.ESR1.T-47D-B_E2_R5020 192 bp overlap
ChIP breast_tumor_Male_28 GSE104399.ESR1.breast_tumor_Male_28 257 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 349 bp overlap
FOSL1 1 dataset
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 162 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 806 bp overlap
ChIP DE DE-FOXA2-2 860 bp overlap
GATA1 1 dataset
Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 939 bp overlap
ChIP DE DE-GATA4-2 949 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 381 bp overlap
ChIP foregut GSE117136.GATA4.foregut 259 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 949 bp overlap
ChIP DE DE-GATA6-2 949 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 440 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 949 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 509 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 432 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 895 bp overlap
GFI1 2 datasets
ChIP THP-1 GSE90769.GFI1.THP-1 294 bp overlap
ChIP THP-1_OG86 GSE90769.GFI1.THP-1_OG86 284 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 811 bp overlap
KLF14 1 dataset
Motif DE_60h DE_60h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_60h DE_60h-KLF16_MA0741.1 11 bp overlap
KMT2A 2 datasets
ChIP MV4-11 GSE79899.KMT2A.MV4-11 383 bp overlap
ChIP THP-1 GSE79899.KMT2A.THP-1 202 bp overlap
MZF1 1 dataset
Motif DE_60h DE_60h-MZF1_MA0056.3 8 bp overlap
Mecom 1 dataset
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 174 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_28 GSE104399.PGR.breast_tumor_Male_28 347 bp overlap
PHF19 1 dataset
ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 232 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 257 bp overlap
POU5F1 1 dataset
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 600 bp overlap
RBPJ 1 dataset
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1_CEBPA-ER GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER 234 bp overlap
RXR 1 dataset
ChIP macrophage ERP008801.RXR.macrophage 291 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 873 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 897 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 905 bp overlap
SMARCA4 2 datasets
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 263 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 128 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 403 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 607 bp overlap
SP4 1 dataset
Motif DE_60h DE_60h-SP4_MA0685.2 9 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 155 bp overlap
SP8 1 dataset
Motif DE_60h DE_60h-SP8_MA0747.2 11 bp overlap
SPI1 6 datasets
ChIP HL-60 ENCFF645GBT 271 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 139 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 90 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 202 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 183 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 125 bp overlap
STAT3 1 dataset
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 174 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 278 bp overlap
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
ZIC2 2 datasets
ChIP HEK293 ENCFF033NQQ 96 bp overlap
ChIP HEK293 ENCFF033NQQ 459 bp overlap