chr11 : 19,321,376 – 19,321,919
543 bp 60 TFs 0 linked genes
This 543 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:19,316,376 – 19,326,919
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
BACH2 1 dataset
Motif DE_72h DE_72h-BACH2_MA1470.2 19 bp overlap
BCL11A 2 datasets
Motif DE_60h DE_60h-BCL11A_MA2324.1 7 bp overlap
Motif DE_72h DE_72h-BCL11A_MA2324.1 7 bp overlap
Crx 2 datasets
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
ESR2 2 datasets
Motif DE_60h DE_60h-ESR2_MA0258.2 15 bp overlap
Motif DE_72h DE_72h-ESR2_MA0258.2 15 bp overlap
ETV3 1 dataset
Motif DE_72h DE_72h-ETV3_MA0763.2 9 bp overlap
EZH2 1 dataset
ChIP THP-1 GSE135024.EZH2.THP-1 262 bp overlap
FIGLA 3 datasets
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 300 bp overlap
FOXH1 2 datasets
Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap
Motif DE_72h DE_72h-FOXH1_MA0479.2 8 bp overlap
GATA1::TAL1 2 datasets
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_72h DE_72h-GATA1TAL1_MA0140.3 17 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 543 bp overlap
ChIP DE DE-GATA4-2 543 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 233 bp overlap
GATA5 2 datasets
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 543 bp overlap
ChIP DE DE-GATA6-2 543 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 543 bp overlap
ChIP foregut GSE117136.GATA6.foregut 261 bp overlap
GSC 2 datasets
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 2 datasets
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
Gata3 2 datasets
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
JUND 2 datasets
Motif DE_60h DE_60h-JUND_MA0492.2 11 bp overlap
Motif DE_72h DE_72h-JUND_MA0492.2 11 bp overlap
MAZ 2 datasets
Motif DE_60h DE_60h-MAZ_MA1522.2 8 bp overlap
Motif DE_72h DE_72h-MAZ_MA1522.2 8 bp overlap
MYOD1 1 dataset
Motif DE_72h DE_72h-MYOD1_MA0499.3 9 bp overlap
OTX1 2 datasets
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
PITX1 2 datasets
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX2 2 datasets
Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap
Motif DE_72h DE_72h-PITX2_MA1547.2 8 bp overlap
PITX3 2 datasets
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
Ptf1A 1 dataset
Motif DE_72h DE_72h-Ptf1A_MA1620.2 8 bp overlap
REST 6 datasets
ChIP GM12878 ENCSR000BGF.REST.GM12878 125 bp overlap
ChIP H1 ENCFF203SWY 438 bp overlap
ChIP H1 ENCFF429RUE 178 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 287 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 287 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 134 bp overlap
RHOXF1 2 datasets
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
RUNX3 1 dataset
Motif DE_72h DE_72h-RUNX3_MA0684.3 8 bp overlap
RXRB 2 datasets
Motif DE_60h DE_60h-RXRB_MA1555.1 14 bp overlap
Motif DE_72h DE_72h-RXRB_MA1555.1 14 bp overlap
RXRG 2 datasets
Motif DE_60h DE_60h-RXRG_MA1556.1 14 bp overlap
Motif DE_72h DE_72h-RXRG_MA1556.1 14 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 139 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 502 bp overlap
SNAI2 1 dataset
Motif DE_72h DE_72h-SNAI2_MA0745.3 8 bp overlap
SNAI3 1 dataset
Motif DE_72h DE_72h-SNAI3_MA1559.2 9 bp overlap
SOX10 2 datasets
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
SOX12 2 datasets
Motif DE_60h DE_60h-SOX12_MA1561.2 10 bp overlap
Motif DE_72h DE_72h-SOX12_MA1561.2 10 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 257 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 111 bp overlap
Sox11 2 datasets
Motif DE_60h DE_60h-Sox11_MA0869.3 8 bp overlap
Motif DE_72h DE_72h-Sox11_MA0869.3 8 bp overlap
Sox17 2 datasets
Motif DE_60h DE_60h-Sox17_MA0078.3 10 bp overlap
Motif DE_72h DE_72h-Sox17_MA0078.3 10 bp overlap
Sox6 2 datasets
Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap
Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap
Sox7 2 datasets
Motif DE_60h DE_60h-Sox7_MA2095.1 10 bp overlap
Motif DE_72h DE_72h-Sox7_MA2095.1 10 bp overlap
TBX21 2 datasets
Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap
Motif DE_72h DE_72h-TBX21_MA0690.3 10 bp overlap
TBXT 2 datasets
Motif DE_60h DE_60h-TBXT_MA0009.2 16 bp overlap
Motif DE_72h DE_72h-TBXT_MA0009.2 16 bp overlap
TCF4 1 dataset
Motif DE_72h DE_72h-TCF4_MA0830.3 8 bp overlap
TFAP2A 2 datasets
Motif DE_60h DE_60h-TFAP2A_MA0872.1 13 bp overlap
Motif DE_72h DE_72h-TFAP2A_MA0872.1 13 bp overlap
TFAP2B 2 datasets
Motif DE_60h DE_60h-TFAP2B_MA0813.1 13 bp overlap
Motif DE_72h DE_72h-TFAP2B_MA0813.1 13 bp overlap
TFAP2C 2 datasets
Motif DE_60h DE_60h-TFAP2C_MA0815.1 13 bp overlap
Motif DE_72h DE_72h-TFAP2C_MA0815.1 13 bp overlap
THRA 2 datasets
Motif DE_60h DE_60h-THRA_MA1969.2 18 bp overlap
Motif DE_72h DE_72h-THRA_MA1969.2 18 bp overlap
TP53 1 dataset
ChIP IMR-90 GSE42728.TP53.IMR-90 115 bp overlap
TRPS1 2 datasets
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
VEZF1 2 datasets
Motif DE_60h DE_60h-VEZF1_MA1578.2 6 bp overlap
Motif DE_72h DE_72h-VEZF1_MA1578.2 6 bp overlap
ZEB1 3 datasets
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ZNF341 2 datasets
Motif DE_60h DE_60h-ZNF341_MA1655.2 8 bp overlap
Motif DE_72h DE_72h-ZNF341_MA1655.2 8 bp overlap
ZNF354C 2 datasets
Motif DE_60h DE_60h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_72h DE_72h-ZNF354C_MA0130.1 6 bp overlap
ZNF460 2 datasets
Motif DE_60h DE_60h-ZNF460_MA1596.1 16 bp overlap
Motif DE_72h DE_72h-ZNF460_MA1596.1 16 bp overlap
ZNF530 2 datasets
Motif DE_60h DE_60h-ZNF530_MA1981.2 14 bp overlap
Motif DE_72h DE_72h-ZNF530_MA1981.2 14 bp overlap
ZNF677 2 datasets
Motif DE_60h DE_60h-ZNF677_MA2101.1 12 bp overlap
Motif DE_72h DE_72h-ZNF677_MA2101.1 12 bp overlap
ZNF770 4 datasets
Motif DE_60h DE_60h-ZNF770_MA2099.1 8 bp overlap
Motif DE_60h DE_60h-ZNF770_MA2099.1 8 bp overlap
Motif DE_72h DE_72h-ZNF770_MA2099.1 8 bp overlap
Motif DE_72h DE_72h-ZNF770_MA2099.1 8 bp overlap
Zfp335 1 dataset
Motif DE_72h DE_72h-Zfp335_MA2002.2 7 bp overlap
Znf423 1 dataset
Motif DE_72h DE_72h-Znf423_MA0116.1 15 bp overlap
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