chr10 : 90,107,575 90,108,392
817 bp 59 TFs 0 linked genes
This 817 bp open chromatin element has no linked target genes and is bound by 59 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:90,102,575 – 90,113,392
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
ATF4 1 dataset
Motif DE_48h DE_48h-ATF4_MA0833.3 10 bp overlap
BARX1 1 dataset
Motif DE_48h DE_48h-BARX1_MA0875.2 6 bp overlap
BSX 1 dataset
Motif DE_48h DE_48h-BSX_MA0876.2 6 bp overlap
CEBPG 1 dataset
Motif DE_48h DE_48h-CEBPG_MA1636.2 10 bp overlap
CUX1 1 dataset
Motif DE_72h DE_72h-CUX1_MA0754.3 9 bp overlap
DLX1 1 dataset
Motif DE_48h DE_48h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_48h DE_48h-DLX6_MA0882.2 6 bp overlap
DUX4 2 datasets
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
DUXA 2 datasets
Motif DE_48h DE_48h-DUXA_MA0884.2 13 bp overlap
Motif DE_72h DE_72h-DUXA_MA0884.2 13 bp overlap
Dlx3 1 dataset
Motif DE_48h DE_48h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_48h DE_48h-Dlx4_MA0881.2 6 bp overlap
Dmrt1 1 dataset
Motif DE_72h DE_72h-Dmrt1_MA1603.2 9 bp overlap
Dux 2 datasets
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
Motif DE_72h DE_72h-Dux_MA0611.3 11 bp overlap
FOS 1 dataset
Motif DE_48h DE_48h-FOS_MA0476.2 8 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 737 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 817 bp overlap
ChIP DE DE-GATA4-2 817 bp overlap
GATA5 1 dataset
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 817 bp overlap
ChIP DE DE-GATA6-2 817 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 548 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 204 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 290 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 282 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 817 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 187 bp overlap
GBX2 1 dataset
Motif DE_48h DE_48h-GBX2_MA0890.2 6 bp overlap
GLIS3 1 dataset
Motif DE_48h DE_48h-GLIS3_MA0737.1 14 bp overlap
Gata3 1 dataset
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HESX1 1 dataset
Motif DE_48h DE_48h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif DE_48h DE_48h-HOXA7_MA1498.3 6 bp overlap
Jun 1 dataset
Motif DE_48h DE_48h-Jun_MA0489.3 8 bp overlap
LBX2 1 dataset
Motif DE_48h DE_48h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_48h DE_48h-LHX2_MA0700.3 6 bp overlap
LHX6 1 dataset
Motif DE_72h DE_72h-LHX6_MA0658.2 8 bp overlap
MEF2B 1 dataset
Motif DE_72h DE_72h-MEF2B_MA0660.1 12 bp overlap
MEF2D 1 dataset
Motif DE_72h DE_72h-MEF2D_MA0773.1 12 bp overlap
MSX1 1 dataset
Motif DE_48h DE_48h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_48h DE_48h-MSX2_MA0708.3 6 bp overlap
Mecom 1 dataset
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
Msx3 1 dataset
Motif DE_48h DE_48h-Msx3_MA0709.2 6 bp overlap
NR2C2 1 dataset
Motif DE_72h DE_72h-NR2C2_MA0504.2 14 bp overlap
NR2F1 1 dataset
Motif DE_72h DE_72h-NR2F1_MA1537.2 13 bp overlap
Nobox 1 dataset
Motif DE_48h DE_48h-Nobox_MA0125.2 6 bp overlap
PAX3 1 dataset
Motif DE_72h DE_72h-PAX3_MA0780.1 10 bp overlap
PHOX2A 2 datasets
Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
POU4F2 1 dataset
Motif DE_72h DE_72h-POU4F2_MA0683.2 15 bp overlap
PROP1 1 dataset
Motif DE_48h DE_48h-PROP1_MA0715.1 11 bp overlap
Pax7 2 datasets
Motif DE_48h DE_48h-Pax7_MA0680.3 10 bp overlap
Motif DE_72h DE_72h-Pax7_MA0680.3 10 bp overlap
RAX 1 dataset
Motif DE_48h DE_48h-RAX_MA0718.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 108 bp overlap
SMAD2_3 4 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 271 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 463 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 361 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 394 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 701 bp overlap
SP5 1 dataset
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
TEF 1 dataset
Motif DE_72h DE_72h-TEF_MA0843.2 10 bp overlap
THRB 1 dataset
Motif DE_72h DE_72h-THRB_MA1574.2 13 bp overlap
TRPS1 1 dataset
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
VENTX 1 dataset
Motif DE_72h DE_72h-VENTX_MA0724.1 9 bp overlap
ZFP14 1 dataset
Motif DE_48h DE_48h-ZFP14_MA1972.1 15 bp overlap
ZNF189 1 dataset
Motif DE_48h DE_48h-ZNF189_MA1725.2 9 bp overlap
ZNF341 1 dataset
Motif DE_48h DE_48h-ZNF341_MA1655.2 8 bp overlap
ZNF677 1 dataset
Motif DE_48h DE_48h-ZNF677_MA2101.1 12 bp overlap
ZNF816 1 dataset
Motif DE_48h DE_48h-ZNF816_MA1719.2 15 bp overlap