chr10 : 63,865,289 – 63,865,623
334 bp 69 TFs 1 linked gene
This 334 bp open chromatin element is linked to ENSG00000228566 and is bound by 69 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000228566 6.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:63,860,289 – 63,870,623
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 155 bp overlap
CTCF 66 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 225 bp overlap
ChIP AG04450 ENCFF116DJL 293 bp overlap
ChIP BE2C ENCFF757SRF 302 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 195 bp overlap
ChIP Caco-2 ENCFF753NZV 96 bp overlap
ChIP Caco-2 ENCFF934QYS 217 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 148 bp overlap
ChIP Calu3 ENCFF526MDS 313 bp overlap
ChIP Calu3 ENCFF526MDS 299 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 138 bp overlap
Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap
Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap
Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap
Motif DE_36h DE_36h-CTCF_MA1929.2 31 bp overlap
Motif DE_60h DE_60h-CTCF_MA0139.2 15 bp overlap
Motif DE_60h DE_60h-CTCF_MA1929.2 31 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 160 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 196 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 164 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 305 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 204 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 303 bp overlap
ChIP GM12865 ENCSR000DRE.CTCF.GM12865 107 bp overlap
ChIP GM12872 ENCFF697BYI 280 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 161 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 101 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 158 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 148 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 148 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 110 bp overlap
ChIP K562 ENCFF598YSU 271 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 204 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 160 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 298 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 229 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 ENCFF954TUV 205 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 229 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 218 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 218 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 226 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 138 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 311 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 155 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 200 bp overlap
ChIP PC-3 ENCFF487TUI 334 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 334 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 334 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 142 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 97 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 304 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 293 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 117 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 141 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 123 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DUH.CTCF.fibroblast_FORESKIN 155 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 118 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 209 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 144 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 112 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 326 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 288 bp overlap
CTCFL 2 datasets
Motif DE_36h DE_36h-CTCFL_MA1102.3 8 bp overlap
Motif DE_60h DE_60h-CTCFL_MA1102.3 8 bp overlap
ELF1 2 datasets
Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap
Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap
ELF3 2 datasets
Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap
Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 197 bp overlap
ERF::FIGLA 1 dataset
Motif DE_36h DE_36h-ERFFIGLA_MA1934.2 13 bp overlap
ERF::FOXI1 1 dataset
Motif DE_36h DE_36h-ERFFOXI1_MA1935.2 10 bp overlap
ERF::FOXO1 1 dataset
Motif DE_36h DE_36h-ERFFOXO1_MA1936.2 12 bp overlap
ESR1 1 dataset
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 214 bp overlap
ETV1 2 datasets
Motif DE_36h DE_36h-ETV1_MA0761.3 9 bp overlap
Motif DE_36h DE_36h-ETV1_MA0761.3 9 bp overlap
ETV2::FOXI1 1 dataset
Motif DE_36h DE_36h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV5::FOXI1 1 dataset
Motif DE_36h DE_36h-ETV5FOXI1_MA1946.2 12 bp overlap
EZH2 1 dataset
ChIP SF8628 GSE94834.EZH2.SF8628 178 bp overlap
Erg 1 dataset
Motif DE_36h DE_36h-Erg_MA0474.4 10 bp overlap
FLI1::FOXI1 1 dataset
Motif DE_36h DE_36h-FLI1FOXI1_MA1950.2 11 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 258 bp overlap
FOXO1::ELF1 1 dataset
Motif DE_36h DE_36h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK1 1 dataset
Motif DE_36h DE_36h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXO1::ELK3 1 dataset
Motif DE_36h DE_36h-FOXO1ELK3_MA1955.2 13 bp overlap
FOXO1::FLI1 1 dataset
Motif DE_36h DE_36h-FOXO1FLI1_MA1956.2 13 bp overlap
Foxq1 1 dataset
Motif DE_36h DE_36h-Foxq1_MA0040.2 10 bp overlap
GABPA 1 dataset
Motif DE_36h DE_36h-GABPA_MA0062.4 10 bp overlap
HMBOX1 1 dataset
Motif DE_36h DE_36h-HMBOX1_MA0895.2 7 bp overlap
Hand1::Tcf3 2 datasets
Motif DE_36h DE_36h-Hand1Tcf3_MA0092.2 9 bp overlap
Motif DE_60h DE_60h-Hand1Tcf3_MA0092.2 9 bp overlap
IKZF1 1 dataset
Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap
IKZF2 2 datasets
Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap
Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 3 datasets
Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap
Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap
Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 239 bp overlap
KLF6 1 dataset
Motif DE_36h DE_36h-KLF6_MA1517.2 9 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 134 bp overlap
Nr5A2 1 dataset
Motif DE_36h DE_36h-Nr5A2_MA0505.3 9 bp overlap
PLAGL2 2 datasets
Motif DE_36h DE_36h-PLAGL2_MA1548.2 8 bp overlap
Motif DE_60h DE_60h-PLAGL2_MA1548.2 8 bp overlap
PRDM9 1 dataset
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
RARA::RXRA 1 dataset
Motif DE_36h DE_36h-RARARXRA_MA0159.1 17 bp overlap
Rarb 1 dataset
Motif DE_36h DE_36h-Rarb_MA0858.1 17 bp overlap
SMAD2 3 datasets
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 189 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 334 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 334 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 334 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 229 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 282 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 320 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 334 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 325 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 186 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 184 bp overlap
SMC1 1 dataset
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 295 bp overlap
SMC3 2 datasets
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 216 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 309 bp overlap
SOX12 1 dataset
Motif DE_36h DE_36h-SOX12_MA1561.2 10 bp overlap
SOX14 1 dataset
Motif DE_36h DE_36h-SOX14_MA1562.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 227 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 324 bp overlap
SOX8 1 dataset
Motif DE_36h DE_36h-SOX8_MA0868.3 7 bp overlap
SPIB 1 dataset
Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap
SRY 1 dataset
Motif DE_36h DE_36h-SRY_MA0084.2 7 bp overlap
STAT3 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 137 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 242 bp overlap
Sox17 1 dataset
Motif DE_36h DE_36h-Sox17_MA0078.3 10 bp overlap
Sox6 1 dataset
Motif DE_36h DE_36h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_36h DE_36h-Sox7_MA2095.1 10 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 154 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 230 bp overlap
ZIC1 2 datasets
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
Motif DE_60h DE_60h-ZIC1_MA0696.1 14 bp overlap
ZIC4 2 datasets
Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap
Motif DE_60h DE_60h-ZIC4_MA0751.2 14 bp overlap
ZIC5 5 datasets
Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap
Motif DE_60h DE_60h-ZIC5_MA1584.2 15 bp overlap
ChIP HCT-116_WT-CT289 GSE127960.ZIC5.HCT-116_WT-CT289 297 bp overlap
ChIP HCT-116_sc1 GSE127960.ZIC5.HCT-116_sc1 259 bp overlap
ChIP HCT-116_sc2 GSE127960.ZIC5.HCT-116_sc2 334 bp overlap
ZKSCAN5 1 dataset
Motif DE_36h DE_36h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF135 1 dataset
Motif DE_36h DE_36h-ZNF135_MA1587.1 14 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 159 bp overlap
ZNF175 2 datasets
Motif DE_36h DE_36h-ZNF175_MA2332.1 9 bp overlap
Motif DE_36h DE_36h-ZNF175_MA2332.1 9 bp overlap
ZNF343 1 dataset
Motif DE_36h DE_36h-ZNF343_MA1711.2 16 bp overlap
ZSCAN21 1 dataset
Motif DE_36h DE_36h-ZSCAN21_MA2336.1 7 bp overlap
Zic1::Zic2 3 datasets
Motif DE_36h DE_36h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_36h DE_36h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 2 datasets
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
Zic3 3 datasets
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap
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