chr10 : 27,460,714 27,461,433
719 bp 40 TFs 2 linked genes
This 719 bp open chromatin element is linked to RAB18 and ACBD5 and is bound by 40 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
RAB18 43.2 kb Distal Multiome
ACBD5 218.9 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:27,455,714 – 27,466,433
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
CREB1 1 dataset
Motif DE_72h DE_72h-CREB1_MA0018.5 8 bp overlap
CTCFL 1 dataset
Motif DE_72h DE_72h-CTCFL_MA1102.3 8 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 227 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 645 bp overlap
ChIP DE DE-FOXA2-2 606 bp overlap
GATA2 1 dataset
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 699 bp overlap
ChIP DE DE-GATA4-2 716 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 595 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 626 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 553 bp overlap
GATA5 1 dataset
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 15 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 233 bp overlap
ChIP DE DE-GATA6-1 627 bp overlap
ChIP DE DE-GATA6-2 705 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 519 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 632 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 458 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 534 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 577 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 591 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 478 bp overlap
ChIP foregut GSE117136.GATA6.foregut 488 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 420 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 270 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 364 bp overlap
Gata3 1 dataset
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
Gfi1B 1 dataset
Motif DE_72h DE_72h-Gfi1B_MA0483.2 10 bp overlap
HMGA1 2 datasets
ChIP IMR-90_RAS-induced GSE111841.HMGA1.IMR-90_RAS-induced 161 bp overlap
ChIP IMR-90_ctrl GSE111841.HMGA1.IMR-90_ctrl 173 bp overlap
HMGA2 1 dataset
ChIP WTC11 ENCFF535JLP 111 bp overlap
HNF4A 1 dataset
Motif DE_72h DE_72h-HNF4A_MA0114.5 9 bp overlap
HNF4G 1 dataset
Motif DE_72h DE_72h-HNF4G_MA0484.3 9 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 412 bp overlap
Lhx3 1 dataset
Motif DE_72h DE_72h-Lhx3_MA0135.2 12 bp overlap
Mecom 1 dataset
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NFATC3 1 dataset
Motif DE_72h DE_72h-NFATC3_MA0625.3 6 bp overlap
NFATC4 1 dataset
Motif DE_72h DE_72h-NFATC4_MA1525.3 9 bp overlap
NFIA 1 dataset
Motif DE_72h DE_72h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_72h DE_72h-NFIX_MA0671.2 6 bp overlap
Nfatc1 1 dataset
Motif DE_72h DE_72h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif DE_72h DE_72h-Nfatc2_MA0152.3 8 bp overlap
Nr2e3 1 dataset
Motif DE_72h DE_72h-Nr2e3_MA0164.2 6 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 95 bp overlap
PRDM1 1 dataset
Motif DE_72h DE_72h-PRDM1_MA0508.4 7 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 608 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 497 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 299 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 316 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 484 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 463 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 324 bp overlap
SOX21 1 dataset
Motif DE_72h DE_72h-SOX21_MA0866.1 15 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 306 bp overlap
TBX19 1 dataset
Motif DE_72h DE_72h-TBX19_MA0804.2 17 bp overlap
TRPS1 1 dataset
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZNF384 1 dataset
Motif DE_72h DE_72h-ZNF384_MA1125.2 8 bp overlap
ZNF558 1 dataset
Motif DE_72h DE_72h-ZNF558_MA2335.1 29 bp overlap
ZNF652 1 dataset
Motif DE_72h DE_72h-ZNF652_MA1657.2 9 bp overlap