chr9 : 98,942,529 98,942,988
459 bp 33 TFs 2 linked genes
This 459 bp open chromatin element is linked to ENSG00000270412 and COL15A1 and is bound by 33 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000270412 786 bp At TSS Proximity
COL15A1 917 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:98,937,529 – 98,947,988
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
33 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 459 bp overlap
BCL11A 2 datasets
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 69 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 93 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 229 bp overlap
ChIP K562 ENCFF673OEZ 311 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 300 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 84 bp overlap
DIDO1 1 dataset
ChIP K-562 ENCSR167JBG.DIDO1.K-562 310 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 137 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 68 bp overlap
EZH2 2 datasets
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 352 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 154 bp overlap
GATA1 5 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 65 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 128 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 222 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 213 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 351 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 203 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 459 bp overlap
ChIP DE DE-GATA4-2 459 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 448 bp overlap
ChIP DE DE-GATA6-2 459 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 459 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 196 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 310 bp overlap
GTF2I 2 datasets
ChIP K562 ENCFF539BYI 314 bp overlap
ChIP K562 ENCFF539BYI 347 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 299 bp overlap
ChIP K562 ENCFF968WBH 429 bp overlap
HDAC2 4 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 278 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 230 bp overlap
ChIP K562 ENCFF744ALD 302 bp overlap
ChIP K562 ENCFF744ALD 349 bp overlap
IRF1 1 dataset
ChIP K-562 ENCSR854MCV.IRF1.K-562 67 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 105 bp overlap
KDM1A 6 datasets
ChIP K-562 GSE117944.KDM1A.K-562 275 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 187 bp overlap
ChIP K-562 ENCSR000ATX.KDM1A.K-562 235 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 258 bp overlap
ChIP K562 ENCFF128TYE 357 bp overlap
ChIP K562 ENCFF934ZRG 346 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 115 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 77 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 158 bp overlap
RBM25 2 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 216 bp overlap
ChIP K562 ENCFF957ORK 292 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 243 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 369 bp overlap
SUZ12 1 dataset
ChIP hiPSC GSE124903.SUZ12.hiPSC 336 bp overlap
TAL1 3 datasets
ChIP K-562 GSE107726.TAL1.K-562 165 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 114 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 144 bp overlap
TEAD1 2 datasets
ChIP K-562 ENCSR591ASD.TEAD1.K-562 167 bp overlap
ChIP K562 ENCFF254RJL 319 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 283 bp overlap
ZMYM3 3 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 243 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 184 bp overlap
ChIP K562 ENCFF361LXT 299 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR117WTM.ZNF24.K-562 245 bp overlap