chr9 : 87,404,974 87,405,548
574 bp 34 TFs 1 linked gene
This 574 bp open chromatin element is linked to ENSG00000288968 and is bound by 34 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000288968 5.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:87,399,974 – 87,410,548
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP RMG-I GSE104545.ARID1A.RMG-I 461 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 228 bp overlap
BRD2 1 dataset
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 53 bp overlap
BRD3 1 dataset
ChIP K-562_dilution-6-100 GSE140325.BRD3.K-562_dilution-6-100 136 bp overlap
BRD4 2 datasets
ChIP HFOB_DIFF GSE82295.BRD4.HFOB_DIFF 574 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 171 bp overlap
CEBPB 1 dataset
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 193 bp overlap
CRY1 1 dataset
ChIP U2OS GSE44236.CRY1.U2OS 201 bp overlap
CTCF 1 dataset
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 131 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 251 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 406 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 270 bp overlap
ChIP DE DE-FOXA2-2 314 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 261 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 198 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 219 bp overlap
GATA2 1 dataset
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 421 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 473 bp overlap
ChIP DE DE-GATA4-2 574 bp overlap
ChIP foregut GSE117136.GATA4.foregut 444 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 384 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 345 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 484 bp overlap
ChIP DE DE-GATA6-2 569 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 574 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 574 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 527 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 500 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 574 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 574 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 231 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 500 bp overlap
ChIP foregut GSE117136.GATA6.foregut 357 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 539 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 287 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 348 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 141 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 349 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap
MED1 1 dataset
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 97 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 128 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 445 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 54 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 299 bp overlap
NCAPH2 1 dataset
ChIP RMG-I GSE120058.NCAPH2.RMG-I 133 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 248 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 273 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 423 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 318 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 252 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 391 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 202 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 229 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 423 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 97 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 363 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 225 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 389 bp overlap
ZNF16 1 dataset
ChIP HEK293 ENCFF231FLW 218 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 258 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 172 bp overlap