chr9 : 30,065,941 – 30,066,166
225 bp 32 TFs 0 linked genes
This 225 bp open chromatin element has no linked target genes and is bound by 32 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:30,060,941 – 30,071,166
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 152 bp overlap
ChIP LNCaP-abl_DMSO GSE80238.AR.LNCaP-abl_DMSO 80 bp overlap
ARNTL 1 dataset
ChIP U2OS_trough_DMSO GSE85096.ARNTL.U2OS_trough_DMSO 225 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 106 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 197 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 142 bp overlap
CBX3 2 datasets
ChIP HCT-116 ENCSR000BUH.CBX3.HCT-116 204 bp overlap
ChIP HCT116 ENCFF947BOL 225 bp overlap
CDK7 1 dataset
ChIP Jurkat_THZ2102 GSE60027.CDK7.Jurkat_THZ2102 123 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 191 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 214 bp overlap
CREB1 2 datasets
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 174 bp overlap
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 225 bp overlap
CTCF 261 datasets
ChIP 22Rv1 ENCFF466OXN 225 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 225 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 225 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 225 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 225 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 225 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 225 bp overlap
ChIP A-549 ENCSR000DYD.CTCF.A-549 225 bp overlap
ChIP A-549 ENCSR000BHW.CTCF.A-549 225 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 219 bp overlap
ChIP A-549 ENCSR000BHV.CTCF.A-549 184 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 225 bp overlap
ChIP A549 ENCFF034FVO 104 bp overlap
ChIP A549 ENCFF182TCQ 111 bp overlap
ChIP A549 ENCFF434LUY 225 bp overlap
ChIP A673 ENCFF123WOM 225 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 225 bp overlap
ChIP BE2C ENCFF757SRF 215 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 171 bp overlap
ChIP C4-2B ENCFF821XVN 225 bp overlap
ChIP Caco-2 ENCFF934QYS 164 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 190 bp overlap
ChIP Calu3 ENCFF526MDS 225 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 223 bp overlap
ChIP DND-41 ENCFF913MRA 225 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 199 bp overlap
ChIP GM23338 ENCFF531QOI 225 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 225 bp overlap
ChIP GP5D_SIRAD21 GSE51234.CTCF.GP5D_SIRAD21 225 bp overlap
ChIP H1 ENCFF414GZI 175 bp overlap
ChIP H1 ENCFF764RHO 219 bp overlap
ChIP H54 ENCFF255TVO 134 bp overlap
ChIP H9 ENCFF152GTF 220 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 225 bp overlap
ChIP HAP1 GSE94992.CTCF.HAP1 225 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 225 bp overlap
ChIP HAP1_SCC4KO GSE94992.CTCF.HAP1_SCC4KO 152 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 225 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 225 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 225 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 225 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 225 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 225 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 225 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 225 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 225 bp overlap
ChIP HCT-116 ENCSR000BSE.CTCF.HCT-116 225 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 225 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 225 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 225 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 225 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 225 bp overlap
ChIP HCT116 ENCFF003KHP 225 bp overlap
ChIP HCT116 ENCFF209YMI 210 bp overlap
ChIP HCT116 ENCFF373YMA 210 bp overlap
ChIP HEC-1-B GSE139679.CTCF.HEC-1-B 225 bp overlap
ChIP HEC-1-B_FFRR-insertion GSE140868.CTCF.HEC-1-B_FFRR-insertion 109 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 75 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.CTCF.HEC-1-B_RF-insertion 107 bp overlap
ChIP HEC-1-B_RF-mutation GSE140868.CTCF.HEC-1-B_RF-mutation 225 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 225 bp overlap
ChIP HEC-1-B_a12-CBS-deletion GSE140868.CTCF.HEC-1-B_a12-CBS-deletion 101 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 51 bp overlap
ChIP HEK293 ENCFF498RMM 225 bp overlap
ChIP HEK293 ENCFF821TIC 225 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 225 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 203 bp overlap
ChIP HEK293T GSE115862.CTCF.HEK293T 202 bp overlap
ChIP HFFc6 ENCFF005CJI 225 bp overlap
ChIP HFFc6 ENCFF005CJI 167 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 167 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 224 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 225 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 225 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 225 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 225 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 225 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 225 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 225 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 168 bp overlap
ChIP HeLa-S3 ENCFF565UFR 126 bp overlap
ChIP HeLa-S3 ENCFF626XQK 146 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 225 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 225 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 162 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 213 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 225 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 165 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 225 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 225 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 225 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 225 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 225 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 225 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 225 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 225 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 192 bp overlap
ChIP HepG2 ENCFF127KUP 225 bp overlap
ChIP HepG2 ENCFF194VBQ 225 bp overlap
ChIP HepG2 ENCFF348BUL 154 bp overlap
ChIP HepG2 ENCFF668CTD 136 bp overlap
ChIP HepG2 ENCFF757EKU 225 bp overlap
ChIP Jurkat GSE68976.CTCF.Jurkat 218 bp overlap
ChIP Jurkat GSE130140.CTCF.Jurkat 217 bp overlap
ChIP Jurkat_DMSO GSE130140.CTCF.Jurkat_DMSO 225 bp overlap
ChIP Jurkat_GSI3d GSE130140.CTCF.Jurkat_GSI3d 184 bp overlap
ChIP Jurkat_GSI3d_w4hr GSE130140.CTCF.Jurkat_GSI3d_w4hr 210 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 86 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 225 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 142 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 60 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 225 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 215 bp overlap
ChIP LNCAP ENCFF223HIG 225 bp overlap
ChIP LNCAP ENCFF700QXT 225 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 225 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 208 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 166 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 225 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 225 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 225 bp overlap
ChIP MCF 10A ENCFF988BGF 225 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 225 bp overlap
ChIP MCF-10A ERP000783.CTCF.MCF-10A 209 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 225 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 225 bp overlap
ChIP MCF-7 ENCFF139NQI 142 bp overlap
ChIP MCF-7 ENCFF162GNE 225 bp overlap
ChIP MCF-7 ENCFF198DQX 165 bp overlap
ChIP MCF-7 ENCFF210JUZ 225 bp overlap
ChIP MCF-7 ENCFF414SZG 120 bp overlap
ChIP MCF-7 ENCFF424NQR 127 bp overlap
ChIP MCF-7 ENCFF494VXA 190 bp overlap
ChIP MCF-7 ENCFF844STM 127 bp overlap
ChIP MCF-7 ENCFF954TUV 124 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 225 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 225 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 225 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 225 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 225 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 225 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 225 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 208 bp overlap
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 225 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 225 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 225 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 225 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 225 bp overlap
ChIP MCF-7L_t4 GSE108787.CTCF.MCF-7L_t4 225 bp overlap
ChIP MCF-7_1118 GSE124667.CTCF.MCF-7_1118 191 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 225 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.CTCF.MCF-7_E2_SHCTCF 183 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 225 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 225 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 222 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 190 bp overlap
ChIP MCF-7_fulvestrant-resistant GSE118711.CTCF.MCF-7_fulvestrant-resistant 203 bp overlap
ChIP MCF-7_tamoxifen-resistant GSE118711.CTCF.MCF-7_tamoxifen-resistant 185 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 225 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 225 bp overlap
ChIP NB4 ENCFF155DNY 225 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 225 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 225 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 225 bp overlap
ChIP OCI-LY1 ENCFF455ESK 183 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 225 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 225 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 207 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 225 bp overlap
ChIP PANC-1 ENCSR203QEB.CTCF.PANC-1 225 bp overlap
ChIP PC-3 ENCFF487TUI 225 bp overlap
ChIP PC-3 ENCFF487TUI 73 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 225 bp overlap
ChIP PC-9 ENCFF539ULB 225 bp overlap
ChIP PC-9 ENCFF539ULB 72 bp overlap
ChIP Panc1 ENCFF056JQX 225 bp overlap
ChIP Peyers-patch ENCSR799WDT.CTCF.Peyers-patch 147 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 225 bp overlap
ChIP RWPE1 ENCFF200GQF 159 bp overlap
ChIP RWPE2 ENCFF911IEE 225 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 225 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 225 bp overlap
ChIP SK-N-SH ENCFF731NJX 168 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 96 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 102 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 225 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 97 bp overlap
ChIP SiHa GSE143026.CTCF.SiHa 158 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 225 bp overlap
ChIP T-47D ENCSR000BNO.CTCF.T-47D 225 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 225 bp overlap
ChIP T-47D_D538G GSE148277.CTCF.T-47D_D538G 225 bp overlap
ChIP T-47D_NaCl-1h GSE111923.CTCF.T-47D_NaCl-1h 225 bp overlap
ChIP T-47D_NaCl-30min GSE111923.CTCF.T-47D_NaCl-30min 173 bp overlap
ChIP T-47D_NaCl-7-5min GSE111923.CTCF.T-47D_NaCl-7-5min 225 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 225 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 225 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 225 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 225 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 225 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 208 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 225 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 225 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 225 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 221 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 225 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 225 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 76 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 225 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 199 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 225 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 207 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 188 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 185 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h 225 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 225 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-4h 225 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-4h 201 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 203 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-eGFP-Pam3csk-4h 225 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 215 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 193 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 123 bp overlap
ChIP U2OS_ana-telopphase GSE141081.CTCF.U2OS_ana-telopphase 212 bp overlap
ChIP VCaP ENCFF858YQT 225 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 225 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 175 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 191 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 188 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 113 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 213 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 162 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 214 bp overlap
ChIP chondrocyte ENCFF134ORZ 225 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 216 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 186 bp overlap
ChIP endodermal cell ENCFF471YCZ 213 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 196 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 127 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 195 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 187 bp overlap
ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 225 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 225 bp overlap
ChIP hESC_PRIMED GSE69646.CTCF.hESC_PRIMED 220 bp overlap
ChIP hepatocyte ENCFF263BLJ 225 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 225 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 225 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 176 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 110 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 184 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 225 bp overlap
ChIP neural crest cell ENCFF182LWK 225 bp overlap
ChIP neural progenitor cell ENCFF420RBO 225 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 152 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 225 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 224 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 225 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 225 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 225 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 214 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 225 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 208 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 225 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 225 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 218 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 225 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 208 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 225 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 225 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 225 bp overlap
ETV1 3 datasets
ChIP COLO-800 GSE80443.ETV1.COLO-800 90 bp overlap
ChIP GIST GSE22441.ETV1.GIST 106 bp overlap
ChIP MDA-Pca-2b GSE106624.ETV1.MDA-Pca-2b 98 bp overlap
FOXA1 1 dataset
ChIP LNCaP GSE64656.FOXA1.LNCaP 69 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 115 bp overlap
JUN 4 datasets
ChIP MCF-7_E2 GSE102410.JUN.MCF-7_E2 200 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 202 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 199 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 222 bp overlap
MYC 1 dataset
ChIP MCF-7 ENCSR000DMQ.MYC.MCF-7 153 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 224 bp overlap
RAD21 24 datasets
ChIP GP5D GSE51234.RAD21.GP5D 225 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 225 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 225 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 191 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 125 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 225 bp overlap
ChIP HCT116 ENCFF568PEO 225 bp overlap
ChIP HEC-1-B GSE139679.RAD21.HEC-1-B 145 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 204 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 147 bp overlap
ChIP HepG2 ENCFF906QIS 140 bp overlap
ChIP MCF-7 ENCFF694KOM 225 bp overlap
ChIP MCF-7 ENCFF724VCQ 225 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 225 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 225 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 225 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 216 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 208 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 178 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.RAD21.T-47D_NaCl-isotonic-triptolide 225 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 210 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-045m-Flavo-000m 88 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-060m-Flavo-000m 73 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.RAD21.THP-1_siCtrl-NS1-Pam3csk-4h 201 bp overlap
RBPJ 5 datasets
ChIP MDA-MB-157 GSE116868.RBPJ.MDA-MB-157 225 bp overlap
ChIP MDA-MB-157_GSI GSE116868.RBPJ.MDA-MB-157_GSI 225 bp overlap
ChIP NHEK GSE29498.RBPJ.NHEK 119 bp overlap
ChIP SCC_0h GSE156486.RBPJ.SCC_0h 148 bp overlap
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 130 bp overlap
SMARCA4 1 dataset
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 82 bp overlap
SMARCA5 1 dataset
ChIP MCF-7 ENCSR487ASM.SMARCA5.MCF-7 179 bp overlap
SMC1 5 datasets
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 176 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.SMC1.HAP1_WaplKO-33_SCC4KO 213 bp overlap
ChIP HCT-116 GSE131606.SMC1.HCT-116 166 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 225 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.SMC1.HCT-116_RAD21-mAC_500uM_auxin 176 bp overlap
SMC1A 3 datasets
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 225 bp overlap
ChIP MCF-7 GSE76893.SMC1A.MCF-7 140 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 138 bp overlap
SMC3 2 datasets
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 225 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 225 bp overlap
SND1 1 dataset
ChIP NHEK GSE29498.SND1.NHEK 146 bp overlap
STAG1 6 datasets
ChIP HeLa GSE126990.STAG1.HeLa 201 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 201 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 136 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 225 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 206 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 82 bp overlap
TLE3 1 dataset
ChIP LNCaP GSE94682.TLE3.LNCaP 74 bp overlap
TRIM22 2 datasets
ChIP MCF-7 ENCFF596XRL 225 bp overlap
ChIP MCF-7 ENCSR875PEI.TRIM22.MCF-7 221 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 184 bp overlap
ZNF444 2 datasets
ChIP MCF-7 ENCFF602QFR 225 bp overlap
ChIP MCF-7 ENCSR038XIA.ZNF444.MCF-7 215 bp overlap
ZNF775 1 dataset
ChIP HepG2 ENCFF488TVQ 225 bp overlap
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