chr9 : 28,001,172 28,001,577
405 bp 38 TFs 0 linked genes
This 405 bp open chromatin element has no linked target genes and is bound by 38 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:27,996,172 – 28,006,577
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 217 bp overlap
ATF4 1 dataset
Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap
BCL6 1 dataset
Motif DE_12h DE_12h-BCL6_MA0463.3 13 bp overlap
BCL6B 1 dataset
Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap
CREB1 1 dataset
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
DMRTA1 1 dataset
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
Dux 1 dataset
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
ESR1 1 dataset
Motif DE_12h DE_12h-ESR1_MA0112.4 15 bp overlap
GFI1 1 dataset
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 104 bp overlap
HLF 1 dataset
Motif DE_12h DE_12h-HLF_MA0043.4 9 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
JUN 1 dataset
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MXI1 1 dataset
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
MYB 1 dataset
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
OSR1 1 dataset
Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
TCF7 1 dataset
Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap
TEAD1 1 dataset
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
TEAD3 1 dataset
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_12h DE_12h-TFAP2A_MA0872.1 13 bp overlap
TFAP2B 3 datasets
Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap
Motif DE_12h DE_12h-TFAP2B_MA0813.1 13 bp overlap
ChIP SK-N-SH ENCFF869XXQ 323 bp overlap
TFAP2C 5 datasets
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_12h DE_12h-TFAP2C_MA0815.1 13 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 387 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 383 bp overlap
THAP1 1 dataset
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
ZFP42 1 dataset
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF157 1 dataset
Motif DE_12h DE_12h-ZNF157_MA2331.1 21 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 292 bp overlap
ZNF341 1 dataset
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
ZNF35 1 dataset
Motif DE_12h DE_12h-ZNF35_MA2333.1 7 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF677 1 dataset
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
ZNF75A 1 dataset
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap