chr9 : 22,661,042 – 22,662,140

1,098 bp 62 TFs 0 linked genes

This 1.1 kb open chromatin element has no linked target genes and is bound by 62 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

62 transcription factors

Arid3a 1 dataset

Motif DE_36h DE_36h-Arid3a_MA0151.1 6 bp overlap

Atf3 2 datasets

Motif DE_24h DE_24h-Atf3_MA1988.2 7 bp overlap

Motif DE_36h DE_36h-Atf3_MA1988.2 7 bp overlap

BACH1 2 datasets

Motif DE_24h DE_24h-BACH1_MA1633.2 9 bp overlap

Motif DE_36h DE_36h-BACH1_MA1633.2 9 bp overlap

BACH2 2 datasets

Motif DE_24h DE_24h-BACH2_MA1101.3 11 bp overlap

Motif DE_36h DE_36h-BACH2_MA1101.3 11 bp overlap

BATF 2 datasets

Motif DE_24h DE_24h-BATF_MA1634.2 7 bp overlap

Motif DE_36h DE_36h-BATF_MA1634.2 7 bp overlap

BATF3 2 datasets

Motif DE_24h DE_24h-BATF3_MA0835.3 7 bp overlap

Motif DE_36h DE_36h-BATF3_MA0835.3 7 bp overlap

BATF::JUN 2 datasets

Motif DE_24h DE_24h-BATFJUN_MA0462.3 7 bp overlap

Motif DE_36h DE_36h-BATFJUN_MA0462.3 7 bp overlap

BNC2 2 datasets

Motif DE_24h DE_24h-BNC2_MA1928.2 7 bp overlap

Motif DE_36h DE_36h-BNC2_MA1928.2 7 bp overlap

Bach1::Mafk 2 datasets

Motif DE_24h DE_24h-Bach1Mafk_MA0591.2 12 bp overlap

Motif DE_36h DE_36h-Bach1Mafk_MA0591.2 12 bp overlap

Crx 1 dataset

Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap

DUX4 1 dataset

Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap

Dmbx1 1 dataset

Motif DE_36h DE_36h-Dmbx1_MA0883.2 10 bp overlap

FOS 2 datasets

Motif DE_24h DE_24h-FOS_MA0476.2 8 bp overlap

Motif DE_36h DE_36h-FOS_MA0476.2 8 bp overlap

FOS::JUN 2 datasets

Motif DE_24h DE_24h-FOSJUN_MA0099.4 9 bp overlap

Motif DE_36h DE_36h-FOSJUN_MA0099.4 9 bp overlap

FOS::JUNB 2 datasets

Motif DE_24h DE_24h-FOSJUNB_MA1134.2 9 bp overlap

Motif DE_36h DE_36h-FOSJUNB_MA1134.2 9 bp overlap

FOS::JUND 2 datasets

Motif DE_24h DE_24h-FOSJUND_MA1141.2 9 bp overlap

Motif DE_36h DE_36h-FOSJUND_MA1141.2 9 bp overlap

FOSB::JUNB 2 datasets

Motif DE_24h DE_24h-FOSBJUNB_MA1135.2 9 bp overlap

Motif DE_36h DE_36h-FOSBJUNB_MA1135.2 9 bp overlap

FOSL1 2 datasets

Motif DE_24h DE_24h-FOSL1_MA0477.3 9 bp overlap

Motif DE_36h DE_36h-FOSL1_MA0477.3 9 bp overlap

FOSL1::JUN 2 datasets

Motif DE_24h DE_24h-FOSL1JUN_MA1128.2 9 bp overlap

Motif DE_36h DE_36h-FOSL1JUN_MA1128.2 9 bp overlap

FOSL1::JUNB 2 datasets

Motif DE_24h DE_24h-FOSL1JUNB_MA1137.2 9 bp overlap

Motif DE_36h DE_36h-FOSL1JUNB_MA1137.2 9 bp overlap

FOSL1::JUND 2 datasets

Motif DE_24h DE_24h-FOSL1JUND_MA1142.2 8 bp overlap

Motif DE_36h DE_36h-FOSL1JUND_MA1142.2 8 bp overlap

FOSL2 2 datasets

Motif DE_24h DE_24h-FOSL2_MA0478.2 10 bp overlap

Motif DE_36h DE_36h-FOSL2_MA0478.2 10 bp overlap

FOSL2::JUN 2 datasets

Motif DE_24h DE_24h-FOSL2JUN_MA1130.2 9 bp overlap

Motif DE_36h DE_36h-FOSL2JUN_MA1130.2 9 bp overlap

FOSL2::JUNB 2 datasets

Motif DE_24h DE_24h-FOSL2JUNB_MA1138.2 9 bp overlap

Motif DE_36h DE_36h-FOSL2JUNB_MA1138.2 9 bp overlap

FOSL2::JUND 2 datasets

Motif DE_24h DE_24h-FOSL2JUND_MA1144.2 9 bp overlap

Motif DE_36h DE_36h-FOSL2JUND_MA1144.2 9 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-2 294 bp overlap

FOXB1 1 dataset

Motif DE_36h DE_36h-FOXB1_MA0845.1 11 bp overlap

FOXC1 1 dataset

Motif DE_36h DE_36h-FOXC1_MA0032.2 11 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 358 bp overlap

ChIP DE DE-GATA4-2 465 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 330 bp overlap

ChIP DE DE-GATA6-2 374 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 391 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 477 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 566 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 407 bp overlap

GSC 1 dataset

Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap

HOXB13 1 dataset

Motif DE_36h DE_36h-HOXB13_MA0901.3 9 bp overlap

Isl1 1 dataset

Motif DE_36h DE_36h-Isl1_MA1608.2 7 bp overlap

JDP2 2 datasets

Motif DE_24h DE_24h-JDP2_MA0655.1 9 bp overlap

Motif DE_36h DE_36h-JDP2_MA0655.1 9 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 464 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 528 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 339 bp overlap

JUN::JUNB 2 datasets

Motif DE_24h DE_24h-JUNJUNB_MA1132.2 8 bp overlap

Motif DE_36h DE_36h-JUNJUNB_MA1132.2 8 bp overlap

JUNB 2 datasets

Motif DE_24h DE_24h-JUNB_MA0490.3 9 bp overlap

Motif DE_36h DE_36h-JUNB_MA0490.3 9 bp overlap

JUND 2 datasets

Motif DE_24h DE_24h-JUND_MA0491.3 9 bp overlap

Motif DE_36h DE_36h-JUND_MA0491.3 9 bp overlap

Jun 2 datasets

Motif DE_24h DE_24h-Jun_MA0489.3 8 bp overlap

Motif DE_36h DE_36h-Jun_MA0489.3 8 bp overlap

KLF17 2 datasets

Motif DE_24h DE_24h-KLF17_MA1514.2 14 bp overlap

Motif DE_36h DE_36h-KLF17_MA1514.2 14 bp overlap

MAF::NFE2 2 datasets

Motif DE_24h DE_24h-MAFNFE2_MA0501.2 11 bp overlap

Motif DE_36h DE_36h-MAFNFE2_MA0501.2 11 bp overlap

MAFG::NFE2L1 2 datasets

Motif DE_24h DE_24h-MAFGNFE2L1_MA0089.3 11 bp overlap

Motif DE_36h DE_36h-MAFGNFE2L1_MA0089.3 11 bp overlap

MAFK 2 datasets

Motif DE_24h DE_24h-MAFK_MA0496.4 10 bp overlap

Motif DE_36h DE_36h-MAFK_MA0496.4 10 bp overlap

NFE2 2 datasets

Motif DE_24h DE_24h-NFE2_MA0841.2 10 bp overlap

Motif DE_36h DE_36h-NFE2_MA0841.2 10 bp overlap

NFIA 1 dataset

Motif DE_36h DE_36h-NFIA_MA0670.2 6 bp overlap

NFIX 1 dataset

Motif DE_36h DE_36h-NFIX_MA0671.2 6 bp overlap

NKX6-3 1 dataset

Motif DE_36h DE_36h-NKX6-3_MA1530.2 8 bp overlap

Nfe2l2 2 datasets

Motif DE_24h DE_24h-Nfe2l2_MA0150.3 11 bp overlap

Motif DE_36h DE_36h-Nfe2l2_MA0150.3 11 bp overlap

OTX1 1 dataset

Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap

PITX1 1 dataset

Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap

PITX2 1 dataset

Motif DE_36h DE_36h-PITX2_MA1547.2 8 bp overlap

PITX3 1 dataset

Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap

RHOXF1 1 dataset

Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap

SIX2 1 dataset

Motif DE_36h DE_36h-SIX2_MA1119.2 11 bp overlap

SMAD2_3 2 datasets

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 272 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 250 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 230 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 746 bp overlap

ZFP14 2 datasets

Motif DE_24h DE_24h-ZFP14_MA1972.1 15 bp overlap

Motif DE_36h DE_36h-ZFP14_MA1972.1 15 bp overlap

ZNF143 2 datasets

Motif DE_24h DE_24h-ZNF143_MA0088.2 16 bp overlap

Motif DE_36h DE_36h-ZNF143_MA0088.2 16 bp overlap

ZNF410 1 dataset

Motif DE_36h DE_36h-ZNF410_MA0752.2 16 bp overlap

ZNF530 1 dataset

Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap