chr8 : 39,650,877 39,651,608
731 bp 60 TFs 0 linked genes
This 731 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:39,645,877 – 39,656,608
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP H1 ENCFF399KAM 613 bp overlap
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 381 bp overlap
CTCF 3 datasets
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap
Motif DE_60h DE_60h-CTCF_MA0139.2 15 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 251 bp overlap
ChIP BLaER1 ENCFF335XTP 251 bp overlap
DMBX1 1 dataset
ChIP K562 ENCFF972HXB 106 bp overlap
ETV5::FOXO1 2 datasets
Motif DE_36h DE_36h-ETV5FOXO1_MA1947.2 10 bp overlap
Motif DE_60h DE_60h-ETV5FOXO1_MA1947.2 10 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 289 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 701 bp overlap
ChIP DE DE-FOXA2-2 731 bp overlap
GATA2 1 dataset
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 731 bp overlap
ChIP DE DE-GATA4-2 731 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 542 bp overlap
ChIP DE DE-GATA6-2 731 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 515 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 616 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 629 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 731 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HAND2 1 dataset
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
HMBOX1 1 dataset
ChIP K562 ENCFF055GAZ 360 bp overlap
IKZF1 1 dataset
Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 382 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 515 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 602 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 456 bp overlap
MYB 1 dataset
Motif DE_60h DE_60h-MYB_MA0100.4 6 bp overlap
MYOD1 1 dataset
Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap
Mecom 1 dataset
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
NANOG 1 dataset
ChIP GM23338 ENCFF065NZG 245 bp overlap
NEUROG2 1 dataset
Motif DE_60h DE_60h-NEUROG2_MA0669.1 10 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 190 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 590 bp overlap
PRDM1 1 dataset
Motif DE_60h DE_60h-PRDM1_MA0508.4 7 bp overlap
Ptf1A 1 dataset
Motif DE_60h DE_60h-Ptf1A_MA1618.2 9 bp overlap
Rhox11 2 datasets
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
Motif DE_36h DE_36h-Rhox11_MA0629.2 9 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 700 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 682 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 677 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 655 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 526 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 358 bp overlap
SPI1 1 dataset
ChIP K562 ENCFF410ORC 52 bp overlap
SPIB 1 dataset
Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap
SPIC 1 dataset
Motif DE_60h DE_60h-SPIC_MA0687.2 13 bp overlap
Spi1 1 dataset
Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap
Stat2 1 dataset
Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap
TCF12 2 datasets
ChIP K562 ENCFF931DJY 391 bp overlap
ChIP K562 ENCFF931DJY 284 bp overlap
TCF3 1 dataset
ChIP K562 ENCFF319QZT 285 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 328 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
ZNF211 1 dataset
Motif DE_12h DE_12h-ZNF211_MA1974.2 10 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 168 bp overlap
ZNF311 1 dataset
ChIP K562 ENCFF986QSP 100 bp overlap
ZNF416 2 datasets
Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap
Motif DE_36h DE_36h-ZNF416_MA1979.2 10 bp overlap
ZNF549 2 datasets
Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap
Motif DE_60h DE_60h-ZNF549_MA1728.2 8 bp overlap
ZNF740 1 dataset
ChIP K562 ENCFF447IXE 337 bp overlap
Zic1::Zic2 2 datasets
Motif DE_36h DE_36h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 2 datasets
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
Zic3 2 datasets
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap