chr8 : 13,081,802 13,082,427
625 bp 66 TFs 2 linked genes
This 625 bp open chromatin element is linked to DLC1 and TRMT9B and is bound by 66 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
DLC1 51.2 kb Distal Multiome
TRMT9B 130.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:13,076,802 – 13,087,427
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
Arid3a 1 dataset
Motif DE_36h DE_36h-Arid3a_MA0151.1 6 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 68 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 74 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 231 bp overlap
Dmrt1 2 datasets
Motif DE_36h DE_36h-Dmrt1_MA1603.2 9 bp overlap
Motif DE_48h DE_48h-Dmrt1_MA1603.2 9 bp overlap
ELK1::HOXA1 2 datasets
Motif DE_36h DE_36h-ELK1HOXA1_MA1931.1 14 bp overlap
Motif DE_60h DE_60h-ELK1HOXA1_MA1931.1 14 bp overlap
ELK1::HOXB13 2 datasets
Motif DE_36h DE_36h-ELK1HOXB13_MA1932.2 15 bp overlap
Motif DE_60h DE_60h-ELK1HOXB13_MA1932.2 15 bp overlap
EOMES 4 datasets
Motif DE_36h DE_36h-EOMES_MA0800.2 9 bp overlap
Motif DE_48h DE_48h-EOMES_MA0800.2 9 bp overlap
Motif DE_60h DE_60h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 353 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 226 bp overlap
Esrrg 2 datasets
Motif DE_36h DE_36h-Esrrg_MA0643.2 9 bp overlap
Motif DE_60h DE_60h-Esrrg_MA0643.2 9 bp overlap
FEZF2 3 datasets
Motif DE_36h DE_36h-FEZF2_MA2341.1 8 bp overlap
Motif DE_48h DE_48h-FEZF2_MA2341.1 8 bp overlap
Motif DE_60h DE_60h-FEZF2_MA2341.1 8 bp overlap
FOSL2 2 datasets
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 422 bp overlap
ChIP HepG2 ENCFF796NIA 257 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 447 bp overlap
ChIP DE DE-FOXA2-2 486 bp overlap
FOXE1 3 datasets
Motif DE_36h DE_36h-FOXE1_MA1487.3 12 bp overlap
Motif DE_48h DE_48h-FOXE1_MA1487.3 12 bp overlap
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
FOXH1 5 datasets
Motif DE_36h DE_36h-FOXH1_MA0479.2 8 bp overlap
Motif DE_36h DE_36h-FOXH1_MA0479.2 8 bp overlap
Motif DE_48h DE_48h-FOXH1_MA0479.2 8 bp overlap
Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap
Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap
GATA1 1 dataset
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 131 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 538 bp overlap
ChIP DE DE-GATA4-2 625 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 310 bp overlap
GATA5 3 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 475 bp overlap
ChIP DE DE-GATA6-2 598 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 551 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 560 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 625 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 625 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 606 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 572 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 519 bp overlap
ChIP foregut GSE117136.GATA6.foregut 346 bp overlap
Gata3 3 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HOXB2::ELK1 2 datasets
Motif DE_36h DE_36h-HOXB2ELK1_MA1957.1 14 bp overlap
Motif DE_60h DE_60h-HOXB2ELK1_MA1957.1 14 bp overlap
HOXC13 2 datasets
Motif DE_36h DE_36h-HOXC13_MA0907.2 9 bp overlap
Motif DE_60h DE_60h-HOXC13_MA0907.2 9 bp overlap
Hmga1 1 dataset
Motif DE_36h DE_36h-Hmga1_MA2124.1 8 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 434 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 297 bp overlap
Irf1 1 dataset
Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap
KLF16 3 datasets
Motif DE_36h DE_36h-KLF16_MA0741.1 11 bp overlap
Motif DE_48h DE_48h-KLF16_MA0741.1 11 bp overlap
Motif DE_60h DE_60h-KLF16_MA0741.1 11 bp overlap
MAF 2 datasets
Motif DE_36h DE_36h-MAF_MA1520.2 13 bp overlap
Motif DE_60h DE_60h-MAF_MA1520.2 13 bp overlap
MAFA 2 datasets
Motif DE_36h DE_36h-MAFA_MA1521.2 13 bp overlap
Motif DE_60h DE_60h-MAFA_MA1521.2 13 bp overlap
MBD4 1 dataset
ChIP Hep-G2 ENCSR000BQW.MBD4.Hep-G2 231 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MGA 3 datasets
Motif DE_36h DE_36h-MGA_MA0801.1 8 bp overlap
Motif DE_48h DE_48h-MGA_MA0801.1 8 bp overlap
Motif DE_60h DE_60h-MGA_MA0801.1 8 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 134 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 385 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 309 bp overlap
PGR 1 dataset
Motif DE_36h DE_36h-PGR_MA2327.1 9 bp overlap
POLR2A 5 datasets
ChIP HepG2 ENCFF736SLT 457 bp overlap
ChIP IMR-90 ENCFF672YWV 401 bp overlap
ChIP IMR-90 ENCFF672YWV 601 bp overlap
ChIP endothelial cell of umbilical vein ENCFF091YHT 358 bp overlap
ChIP upper lobe of left lung ENCFF095BJW 253 bp overlap
PRDM9 3 datasets
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap
Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap
RBM22 2 datasets
ChIP HepG2 ENCFF292RVQ 462 bp overlap
ChIP HepG2 ENCFF561IAJ 436 bp overlap
RBPJ 2 datasets
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
Rarg 2 datasets
Motif DE_36h DE_36h-Rarg_MA0859.2 15 bp overlap
Motif DE_60h DE_60h-Rarg_MA0859.2 15 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 196 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 532 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 530 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 491 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 470 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 573 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 404 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 473 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 496 bp overlap
SMAD3 4 datasets
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 122 bp overlap
ChIP SUM159PT GSE130364.SMAD3.SUM159PT 469 bp overlap
ChIP breast-cancer_triple-negative GSE130364.SMAD3.breast-cancer_triple-negative 187 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 220 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 229 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 299 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 289 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 325 bp overlap
SREBF1 3 datasets
Motif DE_36h DE_36h-SREBF1_MA0595.1 10 bp overlap
Motif DE_48h DE_48h-SREBF1_MA0595.1 10 bp overlap
Motif DE_60h DE_60h-SREBF1_MA0595.1 10 bp overlap
SREBF2 3 datasets
Motif DE_36h DE_36h-SREBF2_MA0596.1 10 bp overlap
Motif DE_48h DE_48h-SREBF2_MA0596.1 10 bp overlap
Motif DE_60h DE_60h-SREBF2_MA0596.1 10 bp overlap
SSRP1 1 dataset
ChIP Hep-G2 ENCSR571PDN.SSRP1.Hep-G2 159 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 286 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 247 bp overlap
TAL1 1 dataset
ChIP ProEs GSE59087.TAL1.ProEs 156 bp overlap
TBX20 3 datasets
Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap
Motif DE_48h DE_48h-TBX20_MA0689.1 11 bp overlap
Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap
TRPS1 3 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
USF1 1 dataset
ChIP K-562 ENCSR000BKT.USF1.K-562 144 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 146 bp overlap
ZKSCAN1 2 datasets
Motif DE_36h DE_36h-ZKSCAN1_MA1585.2 9 bp overlap
Motif DE_60h DE_60h-ZKSCAN1_MA1585.2 9 bp overlap
ZNF121 1 dataset
ChIP HEK293 ENCFF839FUF 79 bp overlap
ZNF354C 3 datasets
Motif DE_36h DE_36h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_48h DE_48h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_60h DE_60h-ZNF354C_MA0130.1 6 bp overlap
ZNF547 2 datasets
Motif DE_36h DE_36h-ZNF547_MA2334.1 13 bp overlap
Motif DE_60h DE_60h-ZNF547_MA2334.1 13 bp overlap
ZNF558 3 datasets
Motif DE_36h DE_36h-ZNF558_MA2335.1 29 bp overlap
Motif DE_48h DE_48h-ZNF558_MA2335.1 29 bp overlap
Motif DE_60h DE_60h-ZNF558_MA2335.1 29 bp overlap
ZNF75A 3 datasets
Motif DE_36h DE_36h-ZNF75A_MA2097.1 12 bp overlap
Motif DE_48h DE_48h-ZNF75A_MA2097.1 12 bp overlap
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap
Zbtb2 2 datasets
Motif DE_36h DE_36h-Zbtb2_MA2340.1 10 bp overlap
Motif DE_60h DE_60h-Zbtb2_MA2340.1 10 bp overlap
Znf423 3 datasets
Motif DE_36h DE_36h-Znf423_MA0116.1 15 bp overlap
Motif DE_48h DE_48h-Znf423_MA0116.1 15 bp overlap
Motif DE_60h DE_60h-Znf423_MA0116.1 15 bp overlap