chr8 : 6,699,363 6,700,087
724 bp 41 TFs 2 linked genes
This 724 bp open chromatin element is linked to MCPH1-AS1 and AGPAT5 and is bound by 41 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
MCPH1-AS1 8.1 kb Proximal Proximity
AGPAT5 8.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:6,694,363 – 6,705,087
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_Bag-1L_KO_Veh GSE89938.AR.LNCaP_Bag-1L_KO_Veh 190 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 361 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 146 bp overlap
BRD3 1 dataset
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 153 bp overlap
BRD4 1 dataset
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 416 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 152 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF093OYK 201 bp overlap
ChIP BLaER1 ENCFF274GAT 195 bp overlap
ChIP BLaER1 ENCFF460KDD 251 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 235 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D49 GSE139377.ERG.aortic-endothelial-cell_D49 181 bp overlap
ESR1 3 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 262 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 298 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 216 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 194 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 600 bp overlap
ChIP DE DE-FOXA2-2 592 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 268 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 477 bp overlap
ChIP DE DE-GATA4-2 546 bp overlap
ChIP foregut GSE117136.GATA4.foregut 260 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 287 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 410 bp overlap
ChIP DE DE-GATA6-2 614 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 331 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 282 bp overlap
ChIP foregut GSE117136.GATA6.foregut 375 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 343 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 291 bp overlap
GTF2I 1 dataset
ChIP WTC11 ENCFF255XXZ 151 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 255 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 181 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 224 bp overlap
KDM1A 2 datasets
ChIP H1 ENCFF696SGD 330 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 170 bp overlap
KMT2A 1 dataset
ChIP MOLM-13_VTP-d3-180110 GSE127507.KMT2A.MOLM-13_VTP-d3-180110 219 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 318 bp overlap
ChIP WTC11 ENCFF223QFY 391 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 306 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 286 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 653 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 125 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 220 bp overlap
ChIP hESC GSE18292.NANOG.hESC 175 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 378 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 211 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 58 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 510 bp overlap
RELA 1 dataset
ChIP BJAB_4h-activation GSE117250.RELA.BJAB_4h-activation 130 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 181 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 223 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 390 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 335 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 188 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 498 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 618 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 191 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 167 bp overlap
TCF3 2 datasets
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 104 bp overlap
ChIP NPC GSE154479.TCF3.NPC 287 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 273 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 429 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 196 bp overlap