Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

46 transcription factors

AR 4 datasets

ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 152 bp overlap

ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 167 bp overlap

ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 182 bp overlap

ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 145 bp overlap

ARID1A 1 dataset

ChIP RMG-I GSE104545.ARID1A.RMG-I 252 bp overlap

BRD4 1 dataset

ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 202 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF031ISE 364 bp overlap

EOMES 3 datasets

Motif DE_36h DE_36h-EOMES_MA0800.2 9 bp overlap

Motif DE_48h DE_48h-EOMES_MA0800.2 9 bp overlap

ChIP hESC GSE26097.EOMES.hESC 280 bp overlap

EP300 2 datasets

ChIP neural ENCSR843ZUP.EP300.neural 380 bp overlap

ChIP neural cell ENCFF442QNK 429 bp overlap

FOXA1 1 dataset

ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 115 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 533 bp overlap

ChIP DE DE-FOXA2-2 564 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 443 bp overlap

ChIP DE DE-GATA4-2 534 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 404 bp overlap

ChIP DE DE-GATA6-2 531 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 280 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 261 bp overlap

Hic1 3 datasets

Motif DE_36h DE_36h-Hic1_MA0739.2 8 bp overlap

Motif DE_48h DE_48h-Hic1_MA0739.2 8 bp overlap

Motif DE_60h DE_60h-Hic1_MA0739.2 8 bp overlap

Hnf1A 2 datasets

Motif DE_36h DE_36h-Hnf1A_MA1991.2 10 bp overlap

Motif DE_48h DE_48h-Hnf1A_MA1991.2 10 bp overlap

MEIS1 2 datasets

Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap

Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap

MEIS2 2 datasets

Motif DE_36h DE_36h-MEIS2_MA0774.1 8 bp overlap

Motif DE_48h DE_48h-MEIS2_MA0774.1 8 bp overlap

MEIS3 2 datasets

Motif DE_36h DE_36h-MEIS3_MA0775.2 7 bp overlap

Motif DE_48h DE_48h-MEIS3_MA0775.2 7 bp overlap

NCOA1 1 dataset

ChIP LS180 GSE39277.NCOA1.LS180 116 bp overlap

NFIA 3 datasets

Motif DE_36h DE_36h-NFIA_MA0670.2 6 bp overlap

Motif DE_48h DE_48h-NFIA_MA0670.2 6 bp overlap

Motif DE_60h DE_60h-NFIA_MA0670.2 6 bp overlap

NFIC 3 datasets

Motif DE_36h DE_36h-NFIC_MA0161.3 7 bp overlap

Motif DE_48h DE_48h-NFIC_MA0161.3 7 bp overlap

Motif DE_60h DE_60h-NFIC_MA0161.3 7 bp overlap

NFIX 3 datasets

Motif DE_36h DE_36h-NFIX_MA0671.2 6 bp overlap

Motif DE_48h DE_48h-NFIX_MA0671.2 6 bp overlap

Motif DE_60h DE_60h-NFIX_MA0671.2 6 bp overlap

ONECUT2 3 datasets

Motif DE_36h DE_36h-ONECUT2_MA0756.3 8 bp overlap

Motif DE_48h DE_48h-ONECUT2_MA0756.3 8 bp overlap

Motif DE_60h DE_60h-ONECUT2_MA0756.3 8 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 381 bp overlap

RARA::RXRG 3 datasets

Motif DE_36h DE_36h-RARARXRG_MA1149.2 17 bp overlap

Motif DE_48h DE_48h-RARARXRG_MA1149.2 17 bp overlap

Motif DE_60h DE_60h-RARARXRG_MA1149.2 17 bp overlap

REST 2 datasets

ChIP neural ENCSR000BTV.REST.neural 312 bp overlap

ChIP neural cell ENCFF882LXX 465 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 279 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 341 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 280 bp overlap

SMARCC1 1 dataset

ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 222 bp overlap

SOX10 2 datasets

Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap

Motif DE_48h DE_48h-SOX10_MA0442.3 6 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 205 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 529 bp overlap

SOX4 2 datasets

Motif DE_36h DE_36h-SOX4_MA0867.3 8 bp overlap

Motif DE_48h DE_48h-SOX4_MA0867.3 8 bp overlap

SS18 1 dataset

ChIP Aska-SS GSE108025.SS18.Aska-SS 179 bp overlap

Sox11 2 datasets

Motif DE_36h DE_36h-Sox11_MA0869.3 8 bp overlap

Motif DE_48h DE_48h-Sox11_MA0869.3 8 bp overlap

Sox6 2 datasets

Motif DE_36h DE_36h-Sox6_MA0515.1 10 bp overlap

Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap

Sox7 2 datasets

Motif DE_36h DE_36h-Sox7_MA2095.1 10 bp overlap

Motif DE_48h DE_48h-Sox7_MA2095.1 10 bp overlap

TBR1 2 datasets

Motif DE_36h DE_36h-TBR1_MA0802.2 9 bp overlap

Motif DE_48h DE_48h-TBR1_MA0802.2 9 bp overlap

TBX18 2 datasets

Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap

Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap

TBX2 2 datasets

Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap

Motif DE_48h DE_48h-TBX2_MA0688.2 9 bp overlap

TBX20 3 datasets

Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap

Motif DE_48h DE_48h-TBX20_MA0689.1 11 bp overlap

Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap

TBX21 2 datasets

Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap

Motif DE_48h DE_48h-TBX21_MA0690.3 10 bp overlap

TBX3 2 datasets

Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap

Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap

TCF7L2 2 datasets

Motif DE_36h DE_36h-TCF7L2_MA0523.2 9 bp overlap

Motif DE_48h DE_48h-TCF7L2_MA0523.2 9 bp overlap

THAP1 2 datasets

Motif DE_36h DE_36h-THAP1_MA0597.3 8 bp overlap

Motif DE_48h DE_48h-THAP1_MA0597.3 8 bp overlap

Tbx6 2 datasets

Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap

Motif DE_48h DE_48h-Tbx6_MA1567.3 9 bp overlap

ZKSCAN5 2 datasets

Motif DE_36h DE_36h-ZKSCAN5_MA1652.2 9 bp overlap

Motif DE_48h DE_48h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF257 2 datasets

Motif DE_36h DE_36h-ZNF257_MA1710.2 10 bp overlap

Motif DE_48h DE_48h-ZNF257_MA1710.2 10 bp overlap

ZNF317 2 datasets

Motif DE_36h DE_36h-ZNF317_MA1593.2 8 bp overlap

Motif DE_48h DE_48h-ZNF317_MA1593.2 8 bp overlap

Genome Browser