chr7 : 143,886,034 143,886,386
352 bp 29 TFs 1 linked gene
This 352 bp open chromatin element is linked to TCAF1 and is bound by 29 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
TCAF1 763 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:143,881,034 – 143,891,386
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 128 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 261 bp overlap
BCL6 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 234 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 293 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 317 bp overlap
BRD4 4 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 224 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 276 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 263 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 238 bp overlap
CREBBP 2 datasets
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 310 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 324 bp overlap
CTCF 1 dataset
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 168 bp overlap
EBF1 3 datasets
ChIP GM12878 ENCFF813OXE 265 bp overlap
ChIP LCL GSE75503.EBF1.LCL 334 bp overlap
ChIP MUTUL GSE75503.EBF1.MUTUL 349 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2_talen GSE94493.ESR1.MCF-7_E2_talen 148 bp overlap
EZH2 1 dataset
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 168 bp overlap
FOXP1 1 dataset
ChIP B-cell_CD77-pos GSE114803.FOXP1.B-cell_CD77-pos 131 bp overlap
HDAC2 1 dataset
ChIP RH4_DMSO-6H_bioMerck GSE116344.HDAC2.RH4_DMSO-6H_bioMerck 158 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 264 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 283 bp overlap
MYB 1 dataset
ChIP GM12878 ENCSR819ATC.MYB.GM12878 137 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 205 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 66 bp overlap
PHF8 1 dataset
ChIP K562 ENCFF217UCA 59 bp overlap
POLR2A 2 datasets
ChIP GM12891 ENCFF012SUT 126 bp overlap
ChIP thyroid gland ENCFF979LRR 295 bp overlap
POU2AF1 1 dataset
ChIP pre-B-cell GSE107886.POU2AF1.pre-B-cell 273 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 175 bp overlap
RAD21 1 dataset
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 128 bp overlap
RNF2 1 dataset
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 145 bp overlap
SFPQ 1 dataset
ChIP LTAD_EtOH GSE94577.SFPQ.LTAD_EtOH 212 bp overlap
SMARCA4 2 datasets
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 233 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 221 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 56 bp overlap
ZNF143 1 dataset
ChIP K-562 GSE39263.ZNF143.K-562 179 bp overlap