chr1 : 157,135,609 – 157,135,935
326 bp 35 TFs 1 linked gene
This 326 bp open chromatin element is linked to ETV3 and is bound by 35 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ETV3 2.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:157,130,609 – 157,140,935
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
AR 7 datasets
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 138 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 117 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 140 bp overlap
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 282 bp overlap
ChIP breast_tumor_Female_8 GSE104399.AR.breast_tumor_Female_8 183 bp overlap
ChIP breast_tumor_Male_10 GSE104399.AR.breast_tumor_Male_10 182 bp overlap
ChIP breast_tumor_Male_26 GSE104399.AR.breast_tumor_Male_26 257 bp overlap
BRD4 3 datasets
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 162 bp overlap
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 154 bp overlap
ChIP SW480 GSE73319.BRD4.SW480 233 bp overlap
CHD1 1 dataset
ChIP A-549 ENCSR398YBM.CHD1.A-549 98 bp overlap
CTCF 2 datasets
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 117 bp overlap
ChIP brain ENCFF163BBN 51 bp overlap
EP300 3 datasets
ChIP upper lobe of left lung ENCFF024QBJ 261 bp overlap
ChIP upper lobe of left lung ENCFF306FRW 311 bp overlap
ChIP upper lobe of left lung ENCFF720RAR 241 bp overlap
ESR1 21 datasets
ChIP MCF-7_G6274 GSE117941.ESR1.MCF-7_G6274 188 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 191 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 271 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 232 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 154 bp overlap
ChIP SUM44PE_ESR1_wildtype GSE100074.ESR1.SUM44PE_ESR1_wildtype 212 bp overlap
ChIP T-47D-A_E2_R5020 GSE80358.ESR1.T-47D-A_E2_R5020 242 bp overlap
ChIP T-47D_siCont-IL6 GSE126004.ESR1.T-47D_siCont-IL6 258 bp overlap
ChIP T-47D_siCont-Veh GSE126004.ESR1.T-47D_siCont-Veh 208 bp overlap
ChIP T-47D_siFOXA1-Veh GSE126004.ESR1.T-47D_siFOXA1-Veh 157 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 187 bp overlap
ChIP ZR751_E2 GSE72249.ESR1.ZR751_E2 195 bp overlap
ChIP breast-cancer_S176 GSE128018.ESR1.breast-cancer_S176 250 bp overlap
ChIP breast-cancer_S186 GSE128018.ESR1.breast-cancer_S186 248 bp overlap
ChIP breast-cancer_S440-2187 GSE128018.ESR1.breast-cancer_S440-2187 251 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 250 bp overlap
ChIP breast_tumor_Male_11 GSE104399.ESR1.breast_tumor_Male_11 189 bp overlap
ChIP breast_tumor_Male_20 GSE104399.ESR1.breast_tumor_Male_20 206 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 257 bp overlap
ChIP breast_tumor_Male_28 GSE104399.ESR1.breast_tumor_Male_28 177 bp overlap
ChIP pleural-effusion GSE86538.ESR1.pleural-effusion 133 bp overlap
ESRRA 5 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 252 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 214 bp overlap
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 145 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 264 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 278 bp overlap
FOXA1 19 datasets
ChIP LAPC-4_CST_DHT GSE123618.FOXA1.LAPC-4_CST_DHT 259 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 304 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 237 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 241 bp overlap
ChIP T-47D_JC4742 GSE126004.FOXA1.T-47D_JC4742 226 bp overlap
ChIP T-47D_JC4744 GSE126004.FOXA1.T-47D_JC4744 272 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 252 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 262 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 244 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 246 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 222 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 253 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 240 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 170 bp overlap
ChIP breast-cancer_ENOB-2848 GSE128018.FOXA1.breast-cancer_ENOB-2848 227 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 263 bp overlap
ChIP breast-cancer_ENOB-2852 GSE128018.FOXA1.breast-cancer_ENOB-2852 241 bp overlap
ChIP breast-cancer_Veh-131 GSE128018.FOXA1.breast-cancer_Veh-131 283 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 326 bp overlap
FOXA2 5 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 191 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 311 bp overlap
ChIP DE DE-FOXA2-1 293 bp overlap
ChIP DE DE-FOXA2-2 326 bp overlap
ChIP HepG2 ENCFF533COJ 297 bp overlap
GABPA 1 dataset
ChIP liver ENCFF500III 288 bp overlap
GATA2 4 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 122 bp overlap
ChIP ESF GSE108408.GATA2.ESF 151 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 146 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 102 bp overlap
GATA3 5 datasets
ChIP MCF-7 ENCFF352QVM 210 bp overlap
ChIP MCF-7 ENCFF437NQS 212 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 192 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 121 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 134 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 231 bp overlap
ChIP DE DE-GATA4-1 326 bp overlap
ChIP DE DE-GATA4-2 326 bp overlap
ChIP foregut GSE117136.GATA4.foregut 256 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 326 bp overlap
GATA6 4 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 96 bp overlap
ChIP DE DE-GATA6-1 98 bp overlap
ChIP DE DE-GATA6-2 326 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 326 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 154 bp overlap
HMBOX1 1 dataset
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 187 bp overlap
HNF4A 1 dataset
ChIP liver ENCFF354NRH 233 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 121 bp overlap
IRF4 3 datasets
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 158 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 158 bp overlap
ChIP U266 GSE142493.IRF4.U266 203 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 237 bp overlap
KLF9 1 dataset
ChIP MCF-7 ENCFF618FCM 92 bp overlap
NKX2-1 3 datasets
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 326 bp overlap
ChIP NCI-H2087 GSE39998.NKX2-1.NCI-H2087 301 bp overlap
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 326 bp overlap
NR2F2 2 datasets
ChIP MCF-7 ENCFF329FZB 326 bp overlap
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 257 bp overlap
NR3C1 4 datasets
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 220 bp overlap
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 233 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 158 bp overlap
ChIP ZR751_DEX GSE72249.NR3C1.ZR751_DEX 212 bp overlap
PGR 9 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 252 bp overlap
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 230 bp overlap
ChIP T-47D-A_E2_R5020 GSE80358.PGR.T-47D-A_E2_R5020 257 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 246 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 253 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 226 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 246 bp overlap
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 326 bp overlap
ChIP breast_tumor_Male_28 GSE104399.PGR.breast_tumor_Male_28 198 bp overlap
POLR2A 2 datasets
ChIP upper lobe of left lung ENCFF095BJW 297 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 223 bp overlap
RUNX2 2 datasets
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 326 bp overlap
ChIP PER-117 GSE151819.RUNX2.PER-117 196 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 226 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 253 bp overlap
ChIP liver ENCFF807CIA 100 bp overlap
SMAD3 4 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 326 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 326 bp overlap
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 315 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 201 bp overlap
SPDEF 1 dataset
ChIP A-549 GSE86957.SPDEF.A-549 326 bp overlap
STAT3 1 dataset
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 132 bp overlap
TEAD1 1 dataset
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 240 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 326 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 155 bp overlap
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