chr1 : 153,750,132 – 153,750,318
186 bp 29 TFs 0 linked genes
This 186 bp open chromatin element has no linked target genes and is bound by 29 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:153,745,132 – 153,755,318
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 62 bp overlap
ARID1A 2 datasets
ChIP RMG-I GSE120058.ARID1A.RMG-I 180 bp overlap
ChIP RMG-I GSE104545.ARID1A.RMG-I 186 bp overlap
BRD2 2 datasets
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 186 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 118 bp overlap
BRD4 6 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 56 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 186 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 112 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 186 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 186 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 66 bp overlap
CTCF 182 datasets
ChIP A-549 ENCSR000AUE.CTCF.A-549 118 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 186 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 186 bp overlap
ChIP AG09309 ENCFF478XPS 186 bp overlap
ChIP AG10803 ENCFF549AQK 186 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 178 bp overlap
ChIP BJ ENCFF434HEC 186 bp overlap
ChIP BJ ENCSR000DQI.CTCF.BJ 143 bp overlap
ChIP C4-2B ENCFF821XVN 186 bp overlap
ChIP CD14 ENCSR000ATN.CTCF.CD14 71 bp overlap
ChIP COLO-829 GSE81945.CTCF.COLO-829 186 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 118 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 186 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 175 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 180 bp overlap
ChIP H1 ENCFF764RHO 186 bp overlap
ChIP H9 ENCFF152GTF 183 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 153 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 186 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 186 bp overlap
ChIP HEC-1-B GSE139679.CTCF.HEC-1-B 186 bp overlap
ChIP HEC-1-B_FFRR-insertion GSE140868.CTCF.HEC-1-B_FFRR-insertion 120 bp overlap
ChIP HEC-1-B_a12-CBS-deletion GSE140868.CTCF.HEC-1-B_a12-CBS-deletion 69 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 141 bp overlap
ChIP HFF ENCSR000DUM.CTCF.HFF 186 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 126 bp overlap
ChIP HeLa-S3 ENCFF626XQK 171 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 186 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 164 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 186 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 186 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 186 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 108 bp overlap
ChIP K-562 GSE92879.CTCF.K-562 186 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 150 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 156 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 150 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 140 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 152 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 93 bp overlap
ChIP K-562_CRISPRk_N4293 GSE131349.CTCF.K-562_CRISPRk_N4293 110 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 186 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 186 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 186 bp overlap
ChIP K562 ENCFF400DFR 186 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 171 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 186 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 165 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 186 bp overlap
ChIP MCF-7 ENCFF139NQI 186 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 186 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 136 bp overlap
ChIP NB4 ENCFF155DNY 186 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 186 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 186 bp overlap
ChIP Peyers-patch ENCSR419ANE.CTCF.Peyers-patch 148 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 186 bp overlap
ChIP SEM GSE117864.CTCF.SEM 186 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 179 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 186 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 135 bp overlap
ChIP SiHa GSE143026.CTCF.SiHa 117 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 181 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 172 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 186 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 186 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 160 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 127 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 186 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 186 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 121 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 90 bp overlap
ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 186 bp overlap
ChIP artery_tibial ENCSR699BEK.CTCF.artery_tibial 186 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 145 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 186 bp overlap
ChIP breast epithelium ENCFF277RMX 186 bp overlap
ChIP breast epithelium ENCFF277RMX 95 bp overlap
ChIP breast_epithelium ENCSR304XUZ.CTCF.breast_epithelium 186 bp overlap
ChIP breast_epithelium ENCSR697YIN.CTCF.breast_epithelium 155 bp overlap
ChIP cardiac fibroblast ENCFF326EDY 186 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 186 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 186 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 186 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 166 bp overlap
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 186 bp overlap
ChIP colon_transverse ENCSR833FWC.CTCF.colon_transverse 186 bp overlap
ChIP coronary artery ENCFF483TFF 186 bp overlap
ChIP coronary-artery ENCSR175FLL.CTCF.coronary-artery 186 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 175 bp overlap
ChIP endothelial cell of umbilical vein ENCFF677IZD 186 bp overlap
ChIP endothelial cell of umbilical vein ENCFF947JAB 186 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 164 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ALA.CTCF.endothelial_umbilical-vein 186 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DLW.CTCF.endothelial_umbilical-vein 186 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 186 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 109 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 186 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 186 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 125 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 186 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 185 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR559KAB.CTCF.esophagus_muscularis-mucosa 186 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR353DFU.CTCF.esophagus_muscularis-mucosa 137 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR074SFL.CTCF.esophagus_muscularis-mucosa 127 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 186 bp overlap
ChIP esophagus_squamous-epithelium ENCSR838RUX.CTCF.esophagus_squamous-epithelium 186 bp overlap
ChIP esophagus_squamous-epithelium ENCSR773JBP.CTCF.esophagus_squamous-epithelium 173 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 167 bp overlap
ChIP fibroblast of dermis ENCFF986DNJ 186 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 186 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 186 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 174 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 186 bp overlap
ChIP fibroblast_AORTIC_ADVENTITIA ENCSR000DPY.CTCF.fibroblast_AORTIC_ADVENTITIA 139 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 152 bp overlap
ChIP fibroblast_DERMAL ENCSR000APM.CTCF.fibroblast_DERMAL 179 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DWQ.CTCF.fibroblast_FORESKIN 186 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DUH.CTCF.fibroblast_FORESKIN 186 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 140 bp overlap
ChIP fibroblast_MAMMARY ENCSR000DUU.CTCF.fibroblast_MAMMARY 186 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 186 bp overlap
ChIP fibroblast_SKIN_ABDOMEN ENCSR000DPV.CTCF.fibroblast_SKIN_ABDOMEN 172 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 186 bp overlap
ChIP foreskin fibroblast ENCFF219EBQ 186 bp overlap
ChIP foreskin fibroblast ENCFF671HLG 186 bp overlap
ChIP gastrocnemius-medialis ENCSR428BKN.CTCF.gastrocnemius-medialis 186 bp overlap
ChIP gastrocnemius-medialis ENCSR071XWO.CTCF.gastrocnemius-medialis 186 bp overlap
ChIP gastroesophageal sphincter ENCFF569YIT 186 bp overlap
ChIP gastroesophageal sphincter ENCFF582GAX 186 bp overlap
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 186 bp overlap
ChIP gastroesophageal-sphincter ENCSR206ETG.CTCF.gastroesophageal-sphincter 186 bp overlap
ChIP gastroesophageal-sphincter ENCSR661XNQ.CTCF.gastroesophageal-sphincter 186 bp overlap
ChIP gastroesophageal-sphincter ENCSR186NVR.CTCF.gastroesophageal-sphincter 182 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 186 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 160 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 186 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 186 bp overlap
ChIP heart left ventricle ENCFF185CKY 181 bp overlap
ChIP heart left ventricle ENCFF244ZHV 125 bp overlap
ChIP heart left ventricle ENCFF548XHH 186 bp overlap
ChIP heart right ventricle ENCFF435TKW 186 bp overlap
ChIP heart right ventricle ENCFF577TID 186 bp overlap
ChIP heart right ventricle ENCFF767XJQ 186 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 186 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 186 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 143 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 170 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 156 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 186 bp overlap
ChIP liver ENCSR254YRM.CTCF.liver 137 bp overlap
ChIP liver_right-lobe-of ENCSR911GFJ.CTCF.liver_right-lobe-of 186 bp overlap
ChIP lung ENCSR463XCZ.CTCF.lung 186 bp overlap
ChIP lung_left_upper-lobe ENCSR027FSZ.CTCF.lung_left_upper-lobe 186 bp overlap
ChIP lung_left_upper-lobe ENCSR964BKO.CTCF.lung_left_upper-lobe 186 bp overlap
ChIP lung_left_upper-lobe ENCSR970UZD.CTCF.lung_left_upper-lobe 186 bp overlap
ChIP lung_left_upper-lobe ENCSR972LYL.CTCF.lung_left_upper-lobe 186 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 132 bp overlap
ChIP nerve_tibial ENCSR822PJT.CTCF.nerve_tibial 186 bp overlap
ChIP nerve_tibial ENCSR434XLP.CTCF.nerve_tibial 156 bp overlap
ChIP neural progenitor cell ENCFF420RBO 186 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 186 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 138 bp overlap
ChIP ovary ENCSR548DDS.CTCF.ovary 176 bp overlap
ChIP peripheral-blood-neutrophil_US-1 GSE126755.CTCF.peripheral-blood-neutrophil_US-1 186 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 186 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 167 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 154 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 186 bp overlap
ChIP testis ENCFF409BGH 186 bp overlap
ChIP testis ENCSR753RME.CTCF.testis 184 bp overlap
ChIP testis ENCSR981CID.CTCF.testis 151 bp overlap
ChIP thoracic aorta ENCFF012WJQ 186 bp overlap
ChIP thoracic aorta ENCFF166PKA 186 bp overlap
ChIP thoracic-aorta ENCSR549TXG.CTCF.thoracic-aorta 186 bp overlap
ChIP tibial artery ENCFF882IXS 186 bp overlap
ChIP tibial-artery ENCSR079YAP.CTCF.tibial-artery 149 bp overlap
ChIP transverse colon ENCFF077CMZ 186 bp overlap
ChIP upper lobe of left lung ENCFF277NLT 89 bp overlap
ChIP upper lobe of left lung ENCFF374MAK 186 bp overlap
ChIP upper lobe of right lung ENCFF065JCM 186 bp overlap
ChIP vagina ENCSR606TNN.CTCF.vagina 175 bp overlap
FOSL1 1 dataset
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 144 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 186 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-2 115 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 79 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 82 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 153 bp overlap
JUN 1 dataset
ChIP DE_D1 S08-DE-d1-JUN-exp1 61 bp overlap
JUNB 1 dataset
ChIP K562 ENCFF388SEP 52 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 186 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 138 bp overlap
NCAPH2 2 datasets
ChIP RMG-I GSE120058.NCAPH2.RMG-I 186 bp overlap
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 186 bp overlap
NELFCD 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFCD.DLD-1_NELFCD-AID 186 bp overlap
RAD21 6 datasets
ChIP HCT-116 GSE121355.RAD21.HCT-116 169 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 186 bp overlap
ChIP HUVEC-C_normoxia GSE94872.RAD21.HUVEC-C_normoxia 129 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 149 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 179 bp overlap
ChIP liver ENCFF522JHE 186 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 54 bp overlap
REST 1 dataset
ChIP PFSK-1 ENCFF845VHA 186 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 150 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 173 bp overlap
SMARCE1 1 dataset
ChIP K562 ENCFF690CFF 76 bp overlap
SMC1 3 datasets
ChIP DKO GSE131606.SMC1.DKO 186 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 178 bp overlap
ChIP HCAEC GSE101921.SMC1.HCAEC 186 bp overlap
SMC3 1 dataset
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 78 bp overlap
STAG1 1 dataset
ChIP HCAEC GSE101921.STAG1.HCAEC 154 bp overlap
STAG2 2 datasets
ChIP HCAEC GSE101921.STAG2.HCAEC 142 bp overlap
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 142 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 186 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 186 bp overlap
TAF1 1 dataset
ChIP PFSK-1 ENCFF982LZL 186 bp overlap
ZNF83 2 datasets
ChIP K562 ENCFF340RTV 120 bp overlap
ChIP K562 ENCFF340RTV 186 bp overlap
Huangfu Lab · Publications · Resources · Contact