chr7 : 42,294,741 42,295,266
525 bp 45 TFs 0 linked genes
This 525 bp open chromatin element has no linked target genes and is bound by 45 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:42,289,741 – 42,300,266
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 123 bp overlap
CTCF 1 dataset
ChIP NPC GSE115407.CTCF.NPC 190 bp overlap
ELF1 2 datasets
ChIP A-549 GSE122203.ELF1.A-549 159 bp overlap
Motif DE_48h DE_48h-ELF1_MA0473.4 9 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_48h DE_48h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_60h DE_60h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 1 dataset
ChIP THP-1 GSE135024.EZH2.THP-1 183 bp overlap
Elf5 2 datasets
Motif DE_48h DE_48h-Elf5_MA0136.4 8 bp overlap
Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap
FEZF2 1 dataset
Motif DE_48h DE_48h-FEZF2_MA2341.1 8 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 260 bp overlap
ChIP BJ1-hTERT_GATA4 GSE90454.FOXA2.BJ1-hTERT_GATA4 175 bp overlap
ChIP DE DE-FOXA2-1 481 bp overlap
ChIP DE DE-FOXA2-2 418 bp overlap
GATA2 3 datasets
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 230 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 140 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 178 bp overlap
GATA3 2 datasets
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 147 bp overlap
ChIP T47D-A1-2_Dex GSE112491.GATA3.T47D-A1-2_Dex 158 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 214 bp overlap
ChIP DE DE-GATA4-1 514 bp overlap
ChIP DE DE-GATA4-2 496 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 354 bp overlap
ChIP foregut GSE117136.GATA4.foregut 326 bp overlap
GATA5 2 datasets
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 8 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 156 bp overlap
ChIP DE DE-GATA6-1 440 bp overlap
ChIP DE DE-GATA6-2 456 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 313 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 525 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 329 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 310 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 407 bp overlap
IKZF2 2 datasets
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
IRF2 1 dataset
Motif DE_60h DE_60h-IRF2_MA0051.2 16 bp overlap
IRF4 1 dataset
Motif DE_60h DE_60h-IRF4_MA1419.2 14 bp overlap
IRF7 1 dataset
Motif DE_60h DE_60h-IRF7_MA0772.2 13 bp overlap
IRF8 1 dataset
Motif DE_60h DE_60h-IRF8_MA0652.2 13 bp overlap
Ikzf3 1 dataset
Motif DE_48h DE_48h-Ikzf3_MA1992.2 9 bp overlap
Irf1 2 datasets
Motif DE_48h DE_48h-Irf1_MA0050.4 11 bp overlap
Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap
MEIS1 1 dataset
Motif DE_48h DE_48h-MEIS1_MA1639.2 9 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 170 bp overlap
NR1I2 1 dataset
Motif DE_48h DE_48h-NR1I2_MA1533.2 15 bp overlap
PRDM1 1 dataset
Motif DE_60h DE_60h-PRDM1_MA0508.4 7 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 293 bp overlap
PRDM9 1 dataset
Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap
Prdm5 2 datasets
Motif DE_48h DE_48h-Prdm5_MA1999.2 11 bp overlap
Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap
SOX10 1 dataset
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
SOX4 1 dataset
Motif DE_60h DE_60h-SOX4_MA0867.3 8 bp overlap
SP4 1 dataset
Motif DE_60h DE_60h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
SPIC 1 dataset
Motif DE_60h DE_60h-SPIC_MA0687.2 13 bp overlap
Sox11 1 dataset
Motif DE_60h DE_60h-Sox11_MA0869.3 8 bp overlap
Spi1 2 datasets
Motif DE_48h DE_48h-Spi1_MA0080.7 13 bp overlap
Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap
Stat2 1 dataset
Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap
TCF7L2 1 dataset
Motif DE_60h DE_60h-TCF7L2_MA0523.2 9 bp overlap
Yy1 1 dataset
Motif DE_48h DE_48h-Yy1_MA0095.4 8 bp overlap
ZIM3 1 dataset
Motif DE_60h DE_60h-ZIM3_MA1709.2 11 bp overlap
ZNF263 1 dataset
Motif DE_60h DE_60h-ZNF263_MA0528.3 7 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 146 bp overlap
ZNF382 1 dataset
Motif DE_48h DE_48h-ZNF382_MA1594.1 24 bp overlap
ZNF530 2 datasets
Motif DE_48h DE_48h-ZNF530_MA1981.2 14 bp overlap
Motif DE_60h DE_60h-ZNF530_MA1981.2 14 bp overlap
ZNF558 2 datasets
Motif DE_48h DE_48h-ZNF558_MA2335.1 29 bp overlap
Motif DE_60h DE_60h-ZNF558_MA2335.1 29 bp overlap
Zfp335 1 dataset
Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap