chr7 : 28,190,197 28,190,920
723 bp 35 TFs 2 linked genes
This 723 bp open chromatin element is linked to JAZF1 and JAZF1-AS1 and is bound by 35 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
JAZF1 9.6 kb Proximal Proximity
JAZF1-AS1 9.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:28,185,197 – 28,195,920
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 124 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
BRD7 1 dataset
ChIP SUM159PT_JQ1 GSE131097.BRD7.SUM159PT_JQ1 211 bp overlap
CDK7 1 dataset
ChIP Jurkat GSE83777.CDK7.Jurkat 213 bp overlap
CDK8 1 dataset
ChIP SET-2 GSE65138.CDK8.SET-2 207 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 251 bp overlap
EZH2 2 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 498 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 401 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 250 bp overlap
ChIP DE DE-FOXA2-1 595 bp overlap
ChIP DE DE-FOXA2-2 459 bp overlap
GATA1 3 datasets
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 141 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 157 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 55 bp overlap
GATA2 5 datasets
ChIP SH-SY5Y ENCFF485YIB 363 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 326 bp overlap
ChIP SK-N-SH ENCFF764OZD 389 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 181 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 134 bp overlap
GATA3 2 datasets
ChIP BE2C GSE65664.GATA3.BE2C 176 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 229 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 700 bp overlap
ChIP DE DE-GATA4-2 692 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 593 bp overlap
ChIP foregut GSE117136.GATA4.foregut 635 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 658 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 261 bp overlap
GATA6 12 datasets
ChIP AGS GSE51705.GATA6.AGS 154 bp overlap
ChIP DE DE-GATA6-1 634 bp overlap
ChIP DE DE-GATA6-2 694 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 395 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 430 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 524 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 691 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 551 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 671 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 367 bp overlap
ChIP foregut GSE117136.GATA6.foregut 605 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 538 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 292 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 170 bp overlap
JUN 1 dataset
ChIP ESC S34-ESC-d0-JUN-exp2 329 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 369 bp overlap
MYC 2 datasets
ChIP P493-6 GSE77061.MYC.P493-6 138 bp overlap
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 467 bp overlap
MYCN 2 datasets
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 342 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 148 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 156 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 345 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 172 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 143 bp overlap
SCRT2 2 datasets
ChIP HEK293 ENCFF711QQB 133 bp overlap
ChIP HEK293 ENCFF711QQB 435 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 720 bp overlap
SNAI2 2 datasets
ChIP SK-N-SH ENCFF449PID 307 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 167 bp overlap
SPI1 2 datasets
ChIP BDMC_donorG GSE128834.SPI1.BDMC_donorG 111 bp overlap
ChIP BDMC_donorH GSE128834.SPI1.BDMC_donorH 90 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 418 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 195 bp overlap
USF1 1 dataset
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 144 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 601 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 233 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 149 bp overlap
ZNF449 2 datasets
ChIP HEK293 ENCFF764ZIC 203 bp overlap
ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 415 bp overlap