chr6 : 143,962,006 143,962,183
177 bp 37 TFs 1 linked gene
This 177 bp open chromatin element is linked to PLAGL1 and is bound by 37 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PLAGL1 2.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:143,957,006 – 143,967,183
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
ARID1A 3 datasets
ChIP MCF-7 GSE123284.ARID1A.MCF-7 76 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 177 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 87 bp overlap
ASXL3 2 datasets
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 177 bp overlap
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 177 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 177 bp overlap
BRD4 6 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 177 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 177 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 159 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 139 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 177 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 169 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 177 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 68 bp overlap
ESR1 3 datasets
ChIP MCF-7_G6274 GSE117941.ESR1.MCF-7_G6274 56 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 138 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 134 bp overlap
EZH2 1 dataset
ChIP GM23338 ENCFF613YON 177 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 176 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 177 bp overlap
GRHL2 2 datasets
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 107 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 85 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 177 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 87 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 177 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 172 bp overlap
MYOD1 3 datasets
ChIP RD GSE137168.MYOD1.RD 162 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 177 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 147 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 177 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 177 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 177 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 177 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 132 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 177 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 177 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 177 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 177 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 177 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 164 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 166 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 177 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 169 bp overlap
RNF2 1 dataset
ChIP WA01 ENCSR784VUY.RNF2.WA01 177 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 177 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 119 bp overlap
SMAD3 1 dataset
ChIP HCC1954 GSE104760.SMAD3.HCC1954 82 bp overlap
SMARCA4 6 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 88 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 50 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 177 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 177 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCA4.TTC-549_NoDox 155 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 177 bp overlap
SMARCB1 4 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 109 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 63 bp overlap
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 114 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 86 bp overlap
SMARCC1 3 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 177 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 102 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 177 bp overlap
SNAI2 2 datasets
ChIP SMS-CTR GSE137168.SNAI2.SMS-CTR 150 bp overlap
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 177 bp overlap
SOX2 1 dataset
ChIP NPC GSE122631.SOX2.NPC 177 bp overlap
SS18 2 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 177 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 177 bp overlap
SUZ12 1 dataset
ChIP H1 ENCFF881NFR 177 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 161 bp overlap