chr6 : 123,001,402 – 123,001,855

453 bp 66 TFs 2 linked genes

This 453 bp open chromatin element is linked to CLVS2 and ENSG00000285652 and is bound by 66 transcription factors.

Linked Genes

2 genes

Gene	Expression	Dist. to TSS	Distance	Link type
CLVS2		5.2 kb	Proximal	Proximity
ENSG00000285652		5.3 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

66 transcription factors

Bach1::Mafk 1 dataset

Motif DE_60h DE_60h-Bach1Mafk_MA0591.2 12 bp overlap

E2F7 1 dataset

Motif DE_60h DE_60h-E2F7_MA0758.1 14 bp overlap

EOMES 2 datasets

Motif DE_60h DE_60h-EOMES_MA0800.2 9 bp overlap

ChIP hESC GSE26097.EOMES.hESC 218 bp overlap

ESR1 1 dataset

ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 305 bp overlap

ETV5::FOXO1 1 dataset

Motif DE_60h DE_60h-ETV5FOXO1_MA1947.2 10 bp overlap

FIGLA 1 dataset

Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap

FLI1::DRGX 1 dataset

Motif DE_60h DE_60h-FLI1DRGX_MA1949.2 14 bp overlap

FOS 1 dataset

ChIP THP-1_eGFP-Pam3csk-4h GSE103477.FOS.THP-1_eGFP-Pam3csk-4h 156 bp overlap

FOXA1 1 dataset

ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 66 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 441 bp overlap

ChIP DE DE-FOXA2-2 453 bp overlap

FOXC2 1 dataset

Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap

FOXN3 1 dataset

Motif DE_60h DE_60h-FOXN3_MA1489.1 8 bp overlap

FOXP2 1 dataset

Motif DE_60h DE_60h-FOXP2_MA0593.2 9 bp overlap

GATA4 6 datasets

ChIP DE DE-GATA4-1 307 bp overlap

ChIP DE DE-GATA4-2 439 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

ChIP foregut GSE117136.GATA4.foregut 212 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 332 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 295 bp overlap

GATA5 1 dataset

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

GATA6 7 datasets

ChIP DE DE-GATA6-1 405 bp overlap

ChIP DE DE-GATA6-2 388 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 322 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 296 bp overlap

ChIP foregut GSE117136.GATA6.foregut 255 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 268 bp overlap

Gata3 1 dataset

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

IKZF2 1 dataset

Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap

IRF3 1 dataset

Motif DE_60h DE_60h-IRF3_MA1418.2 17 bp overlap

MAF::NFE2 1 dataset

Motif DE_60h DE_60h-MAFNFE2_MA0501.2 11 bp overlap

MAFF 1 dataset

Motif DE_60h DE_60h-MAFF_MA0495.4 11 bp overlap

MAFG::NFE2L1 1 dataset

Motif DE_60h DE_60h-MAFGNFE2L1_MA0089.3 11 bp overlap

MAFK 1 dataset

Motif DE_60h DE_60h-MAFK_MA0496.4 10 bp overlap

MGA 1 dataset

Motif DE_60h DE_60h-MGA_MA0801.1 8 bp overlap

MSC 1 dataset

Motif DE_60h DE_60h-MSC_MA0665.1 10 bp overlap

MYBL2 1 dataset

ChIP A-673 GSE119971.MYBL2.A-673 222 bp overlap

MYF6 1 dataset

Motif DE_60h DE_60h-MYF6_MA0667.1 10 bp overlap

MYOD1 1 dataset

Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap

Mafb 1 dataset

Motif DE_60h DE_60h-Mafb_MA0117.3 11 bp overlap

Mafg 1 dataset

Motif DE_60h DE_60h-Mafg_MA0659.4 12 bp overlap

NFIL3 1 dataset

Motif DE_60h DE_60h-NFIL3_MA0025.3 9 bp overlap

NR2C1 1 dataset

Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap

NR2C2 1 dataset

Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap

NR2F1 1 dataset

Motif DE_60h DE_60h-NR2F1_MA1538.1 15 bp overlap

NRL 1 dataset

Motif DE_60h DE_60h-NRL_MA0842.3 12 bp overlap

Nfat5 1 dataset

Motif DE_60h DE_60h-Nfat5_MA0606.3 8 bp overlap

Nfe2l2 1 dataset

Motif DE_60h DE_60h-Nfe2l2_MA0150.3 11 bp overlap

Nr1H2 1 dataset

Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap

Nr1h3::Rxra 1 dataset

Motif DE_60h DE_60h-Nr1h3Rxra_MA0494.2 16 bp overlap

ONECUT1 1 dataset

Motif DE_60h DE_60h-ONECUT1_MA0679.3 9 bp overlap

PGR 1 dataset

ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 387 bp overlap

Prdm5 1 dataset

Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap

Ptf1A 1 dataset

Motif DE_60h DE_60h-Ptf1A_MA1620.2 8 bp overlap

SCRT1 2 datasets

Motif DE_60h DE_60h-SCRT1_MA0743.3 10 bp overlap

ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 223 bp overlap

SCRT2 2 datasets

Motif DE_60h DE_60h-SCRT2_MA0744.3 10 bp overlap

ChIP HEK293 ENCFF711QQB 194 bp overlap

SNAI2 1 dataset

Motif DE_60h DE_60h-SNAI2_MA0745.3 8 bp overlap

SNAI3 1 dataset

Motif DE_60h DE_60h-SNAI3_MA1559.2 9 bp overlap

SOX8 1 dataset

Motif DE_60h DE_60h-SOX8_MA0868.3 7 bp overlap

SRY 1 dataset

Motif DE_60h DE_60h-SRY_MA0084.2 7 bp overlap

TBR1 1 dataset

Motif DE_60h DE_60h-TBR1_MA0802.2 9 bp overlap

TBX1 1 dataset

Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap

TBX15 1 dataset

Motif DE_60h DE_60h-TBX15_MA0803.1 8 bp overlap

TBX18 1 dataset

Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap

TBX2 1 dataset

Motif DE_60h DE_60h-TBX2_MA0688.2 9 bp overlap

TBX21 1 dataset

Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap

TBX3 1 dataset

Motif DE_60h DE_60h-TBX3_MA1566.3 9 bp overlap

TBX4 1 dataset

Motif DE_60h DE_60h-TBX4_MA0806.1 8 bp overlap

TBX5 1 dataset

Motif DE_60h DE_60h-TBX5_MA0807.1 8 bp overlap

TRPS1 1 dataset

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

Tbx6 1 dataset

Motif DE_60h DE_60h-Tbx6_MA1567.3 9 bp overlap

ZEB1 1 dataset

Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap

ZNF157 1 dataset

Motif DE_60h DE_60h-ZNF157_MA2331.1 21 bp overlap

ZNF214 1 dataset

Motif DE_60h DE_60h-ZNF214_MA1975.2 13 bp overlap

ZNF558 1 dataset

Motif DE_60h DE_60h-ZNF558_MA2335.1 29 bp overlap