chr6 : 118,197,566 118,197,917
351 bp 46 TFs 0 linked genes
This 351 bp open chromatin element has no linked target genes and is bound by 46 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:118,192,566 – 118,202,917
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 351 bp overlap
BRD4 1 dataset
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 351 bp overlap
CHD7 4 datasets
ChIP H1 ENCFF126NLU 326 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 146 bp overlap
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 289 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 351 bp overlap
CTCF 5 datasets
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 351 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 182 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 190 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 167 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 273 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
ELF1 1 dataset
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
EP300 1 dataset
ChIP neural ENCSR843ZUP.EP300.neural 234 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 193 bp overlap
FOXD2 1 dataset
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
FOXH1 1 dataset
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
GATA6 4 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 351 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 210 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 351 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 351 bp overlap
GFI1 1 dataset
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
HNRNPK 1 dataset
ChIP K562 ENCFF954RNO 167 bp overlap
JUN 2 datasets
ChIP ESC S34-ESC-d0-JUN-exp2 334 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 207 bp overlap
MAFF 1 dataset
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Mafb 1 dataset
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
Mecom 1 dataset
Motif DE_12h DE_12h-Mecom_MA0029.2 11 bp overlap
NANOG 6 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 319 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 351 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 317 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 351 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 351 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 351 bp overlap
NRL 1 dataset
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 138 bp overlap
POU5F1 10 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 351 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 310 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 351 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 308 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 315 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 215 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 351 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 221 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 291 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 351 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 344 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 256 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 296 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 271 bp overlap
SATB1 1 dataset
Motif DE_12h DE_12h-SATB1_MA1963.2 7 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 316 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 236 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 300 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 264 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 156 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 341 bp overlap
SMARCA2 1 dataset
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 188 bp overlap
SMARCA4 7 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 351 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 298 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 351 bp overlap
ChIP WA09 GSE105028.SMARCA4.WA09 351 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 351 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 351 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 351 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 351 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 351 bp overlap
SMARCC1 5 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 254 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 269 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 237 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 351 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 351 bp overlap
SOX2 4 datasets
ChIP HNSC GSE69479.SOX2.HNSC 351 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 351 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 203 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 226 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 182 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 344 bp overlap
ZNF143 2 datasets
ChIP WA09 GSE105028.ZNF143.WA09 343 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 351 bp overlap
ZNF341 1 dataset
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
ZNF354A 1 dataset
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF667 1 dataset
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap