chr6 : 112,253,120 112,253,247
127 bp 30 TFs 1 linked gene
This 127 bp open chromatin element is linked to LAMA4 and is bound by 30 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LAMA4 1.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:112,248,120 – 112,258,247
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 127 bp overlap
ASH2L 1 dataset
ChIP VCaP GSE60841.ASH2L.VCaP 127 bp overlap
BRD4 2 datasets
ChIP HEK293T GSE39579.BRD4.HEK293T 127 bp overlap
ChIP HUVEC-C_modGFP GSE93030.BRD4.HUVEC-C_modGFP 84 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 67 bp overlap
ERF 1 dataset
ChIP HAEC_TNFa_4h GSE89970.ERF.HAEC_TNFa_4h 113 bp overlap
ERG 3 datasets
ChIP VCaP GSE49091.ERG.VCaP 87 bp overlap
ChIP aortic-endothelial-cell_D33 GSE139377.ERG.aortic-endothelial-cell_D33 127 bp overlap
ChIP aortic-endothelial-cell_D5 GSE139377.ERG.aortic-endothelial-cell_D5 78 bp overlap
EZH2 1 dataset
ChIP hepatocyte ENCFF552DZB 127 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 127 bp overlap
ChIP DE DE-FOXA2-2 116 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 62 bp overlap
GATA6 1 dataset
ChIP DE_D2 S55-DE-d2-GATA6-exp2 73 bp overlap
GPS2 1 dataset
ChIP hMADS_D0_E GSE152517.GPS2.hMADS_D0_E 65 bp overlap
JUN 1 dataset
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 127 bp overlap
MED1 3 datasets
ChIP G296S_4 GSE85628.MED1.G296S_4 127 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 127 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 75 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCFF746HVJ 127 bp overlap
MYC 1 dataset
ChIP NB69 GSE138295.MYC.NB69 68 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 127 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 76 bp overlap
NOTCH1 2 datasets
ChIP pulmonary-artery_endothelial-cell_siCtrl GSE89786.NOTCH1.pulmonary-artery_endothelial-cell_siCtrl 127 bp overlap
ChIP pulmonary-artery_endothelial-cell_siPFKFB3 GSE89786.NOTCH1.pulmonary-artery_endothelial-cell_siPFKFB3 127 bp overlap
NR2F2 3 datasets
ChIP liver ENCFF565JGD 127 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 107 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 109 bp overlap
POLR2A 1 dataset
ChIP esophagus muscularis mucosa ENCFF432ZCY 110 bp overlap
POU5F1 2 datasets
ChIP NCCIT GSE36134.POU5F1.NCCIT 81 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 127 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 127 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 127 bp overlap
RELA 3 datasets
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 127 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 127 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 85 bp overlap
RNF2 1 dataset
ChIP A-549 ENCSR798EGJ.RNF2.A-549 72 bp overlap
SMARCA4 1 dataset
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 127 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 127 bp overlap
ChIP hESC GSE18292.SOX2.hESC 96 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 71 bp overlap
TAF1 1 dataset
ChIP PFSK-1 ENCFF982LZL 55 bp overlap
TBX5 2 datasets
ChIP G296S GSE85628.TBX5.G296S 98 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 98 bp overlap
ZIM3 2 datasets
ChIP HEK293 GSE76494.ZIM3.HEK293 127 bp overlap
ChIP HEK293T GSE78099.ZIM3.HEK293T 113 bp overlap