Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

37 transcription factors

ARID2 1 dataset

ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 193 bp overlap

ATRX 1 dataset

ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 203 bp overlap

BRD4 7 datasets

ChIP BE2C GSE80151.BRD4.BE2C 203 bp overlap

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 203 bp overlap

ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 203 bp overlap

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 203 bp overlap

ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 203 bp overlap

ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 203 bp overlap

ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 203 bp overlap

CDK9 1 dataset

ChIP Kelly_DMSO GSE107126.CDK9.Kelly_DMSO 196 bp overlap

CHD2 2 datasets

ChIP SK-N-SH ENCFF669KMB 203 bp overlap

ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 203 bp overlap

CSRNP3 1 dataset

ChIP SK-N-SH ENCFF710BXD 203 bp overlap

CTCFL 1 dataset

ChIP Kelly_resistant_JQ1 GSE103030.CTCFL.Kelly_resistant_JQ1 175 bp overlap

EBF3_P177L 1 dataset

ChIP SK-N-SH GSE90682.EBF3_P177L.SK-N-SH 203 bp overlap

EP300 2 datasets

ChIP SK-N-SH ENCFF829RWA 95 bp overlap

ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 203 bp overlap

FOXA2 1 dataset

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 203 bp overlap

FOXJ3 1 dataset

ChIP SK-N-SH ENCFF124KVL 203 bp overlap

GATA1 1 dataset

ChIP K-562 GSE107726.GATA1.K-562 178 bp overlap

GATA2 5 datasets

ChIP SH-SY5Y ENCFF485YIB 203 bp overlap

ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 203 bp overlap

ChIP SK-N-SH ENCFF764OZD 202 bp overlap

ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 203 bp overlap

ChIP TF1 GSE73207.GATA2.TF1 150 bp overlap

GATA3 8 datasets

ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 191 bp overlap

ChIP Kelly GSE94822.GATA3.Kelly 203 bp overlap

ChIP Kelly GSE65664.GATA3.Kelly 203 bp overlap

ChIP SH-SY5Y ENCFF475HYF 181 bp overlap

ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 203 bp overlap

ChIP SH-SY5Y GSE65664.GATA3.SH-SY5Y 203 bp overlap

ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 203 bp overlap

ChIP SK-N-SH ENCFF040SSB 171 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 203 bp overlap

ChIP DE DE-GATA4-2 203 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 195 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 139 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 203 bp overlap

ChIP DE DE-GATA6-2 203 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 203 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 203 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 203 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 203 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 203 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 203 bp overlap

HAND2 3 datasets

ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 203 bp overlap

ChIP Kelly GSE94822.HAND2.Kelly 203 bp overlap

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 203 bp overlap

ISL1 1 dataset

ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 203 bp overlap

KDM1A 2 datasets

ChIP SH-SY5Y_B0_SHLSD18A GSE58258.KDM1A.SH-SY5Y_B0_SHLSD18A 130 bp overlap

ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 203 bp overlap

MXI1 2 datasets

ChIP SK-N-SH ENCFF746HVJ 203 bp overlap

ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 114 bp overlap

MYC 2 datasets

ChIP Kelly GSE138295.MYC.Kelly 177 bp overlap

ChIP NB69 GSE138295.MYC.NB69 203 bp overlap

MYCN 10 datasets

ChIP BE2C GSE80151.MYCN.BE2C 175 bp overlap

ChIP COG-N-415 GSE138295.MYCN.COG-N-415 203 bp overlap

ChIP Kelly GSE94822.MYCN.Kelly 203 bp overlap

ChIP Kelly GSE80151.MYCN.Kelly 203 bp overlap

ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 174 bp overlap

ChIP LA-N-5 GSE138295.MYCN.LA-N-5 203 bp overlap

ChIP NB-1643 GSE138295.MYCN.NB-1643 203 bp overlap

ChIP NB-1643 GSE94782.MYCN.NB-1643 203 bp overlap

ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 203 bp overlap

ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 175 bp overlap

PHOX2B 2 datasets

ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 203 bp overlap

ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 203 bp overlap

PITX3 1 dataset

ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 203 bp overlap

RCOR1 2 datasets

ChIP SK-N-SH ENCFF518EXB 203 bp overlap

ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 203 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 203 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 203 bp overlap

SMAD2_3 1 dataset

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 203 bp overlap

SMARCA4 4 datasets

ChIP NGP GSE134626.SMARCA4.NGP 203 bp overlap

ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 159 bp overlap

ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 203 bp overlap

ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 203 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 203 bp overlap

TBX2 2 datasets

ChIP Kelly GSE94822.TBX2.Kelly 203 bp overlap

ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 203 bp overlap

TCF4 2 datasets

ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 194 bp overlap

ChIP SK-N-SH ENCFF270OWF 203 bp overlap

TEAD4 3 datasets

ChIP BE2C GSE84389.TEAD4.BE2C 203 bp overlap

ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 203 bp overlap

ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 185 bp overlap

TFAP2B 1 dataset

ChIP SK-N-SH ENCFF869XXQ 144 bp overlap

TOX2 2 datasets

ChIP SK-N-SH ENCFF415OYE 203 bp overlap

ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR226NRS.TOX2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 203 bp overlap

TSHZ2 2 datasets

ChIP SK-N-SH ENCFF182EBB 203 bp overlap

ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 203 bp overlap

TWIST1 2 datasets

ChIP BE2C GSE80151.TWIST1.BE2C 203 bp overlap

ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 203 bp overlap

YY1 1 dataset

ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 150 bp overlap

Genome Browser