chr5 : 106,798,090 106,798,296
206 bp 40 TFs 0 linked genes
This 206 bp open chromatin element has no linked target genes and is bound by 40 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:106,793,090 – 106,803,296
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 206 bp overlap
BCL11A 3 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 185 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 133 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 206 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 206 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 179 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 119 bp overlap
EZH2 2 datasets
ChIP LNCaP GSE39459.EZH2.LNCaP 201 bp overlap
ChIP neural progenitor cell ENCFF018MKA 206 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 206 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 206 bp overlap
ChIP DE DE-GATA4-2 206 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 206 bp overlap
ChIP foregut GSE117136.GATA4.foregut 206 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 206 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 206 bp overlap
ChIP DE DE-GATA6-2 206 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 206 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 206 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 206 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 206 bp overlap
ChIP foregut GSE117136.GATA6.foregut 206 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 186 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HEY2 1 dataset
Motif DE_60h DE_60h-HEY2_MA0649.2 9 bp overlap
HIF1A 1 dataset
Motif DE_60h DE_60h-HIF1A_MA1106.2 6 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 206 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 190 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000EBZ.JUND.WA01 142 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 144 bp overlap
MAF 1 dataset
Motif DE_60h DE_60h-MAF_MA1520.2 13 bp overlap
MAFA 1 dataset
Motif DE_60h DE_60h-MAFA_MA1521.2 13 bp overlap
Mafb 1 dataset
Motif DE_60h DE_60h-Mafb_MA0117.3 11 bp overlap
NANOG 5 datasets
ChIP H1 ENCFF747ZPQ 206 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 206 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 174 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 206 bp overlap
ChIP hESC GSE18292.NANOG.hESC 206 bp overlap
NFATC3 1 dataset
Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap
Nfatc1 1 dataset
Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif DE_60h DE_60h-Nfatc2_MA0152.3 8 bp overlap
OTX2 2 datasets
ChIP WTC11 ENCFF634NAO 194 bp overlap
ChIP retina_pigment GSE60024.OTX2.retina_pigment 198 bp overlap
POU5F1 1 dataset
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 206 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 206 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 206 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 206 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 206 bp overlap
Rhox11 1 dataset
Motif DE_60h DE_60h-Rhox11_MA0629.2 9 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 206 bp overlap
SMC3 1 dataset
ChIP HEK293T_CRISPR GSE122299.SMC3.HEK293T_CRISPR 168 bp overlap
SOX2 1 dataset
ChIP HCC95 GSE137459.SOX2.HCC95 206 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 90 bp overlap
SP5 1 dataset
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 178 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 206 bp overlap
ZNF85 1 dataset
Motif DE_60h DE_60h-ZNF85_MA1720.2 12 bp overlap
ZSCAN31 1 dataset
Motif DE_60h DE_60h-ZSCAN31_MA1722.2 18 bp overlap