chr1 : 93,679,668 93,679,844
176 bp 33 TFs 1 linked gene
This 176 bp open chromatin element is linked to BCAR3 and is bound by 33 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
BCAR3 2.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:93,674,668 – 93,684,844
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
33 transcription factors
Source
Cell type
BRD2 4 datasets
ChIP MDA-MB-231_DMSO GSE116879.BRD2.MDA-MB-231_DMSO 97 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD2.MDA-MB-231_DMSO_rDNA 97 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 161 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 103 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 160 bp overlap
BRD4 4 datasets
ChIP MDA-MB-231_JQ1-neg_L GSE136151.BRD4.MDA-MB-231_JQ1-neg_L 69 bp overlap
ChIP PC-3 GSE137207.BRD4.PC-3 175 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 176 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 176 bp overlap
ELF3 1 dataset
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 115 bp overlap
FOS 2 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 132 bp overlap
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 168 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 176 bp overlap
ChIP DE DE-FOXA2-2 121 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 176 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 176 bp overlap
ChIP DE DE-GATA4-2 176 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 118 bp overlap
ChIP foregut GSE117136.GATA4.foregut 152 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 176 bp overlap
GATA6 13 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 164 bp overlap
ChIP DE DE-GATA6-1 176 bp overlap
ChIP DE DE-GATA6-2 176 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 123 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 176 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 136 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 176 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 176 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 176 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 176 bp overlap
ChIP foregut GSE117136.GATA6.foregut 176 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 129 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 176 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 176 bp overlap
MAFK 1 dataset
ChIP IMR-90 ENCFF336DHZ 176 bp overlap
MAX 4 datasets
ChIP A-549 ENCSR000BTJ.MAX.A-549 120 bp overlap
ChIP A549 ENCFF310XGQ 176 bp overlap
ChIP SK-N-SH ENCFF285LXR 176 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 85 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 101 bp overlap
MEN1 1 dataset
ChIP PC-3 GSE132827.MEN1.PC-3 176 bp overlap
MXI1 2 datasets
ChIP IMR-90 ENCFF040YVH 176 bp overlap
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 107 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 176 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 176 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 176 bp overlap
POLR2A 2 datasets
ChIP HeLa-S3 ENCFF224LWS 176 bp overlap
ChIP HeLa-S3 ENCFF773DNG 168 bp overlap
PPARG 1 dataset
ChIP SGBS GSE41629.PPARG.SGBS 81 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 65 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 125 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 106 bp overlap
RAD21 1 dataset
ChIP MDM_H5N1 GSE103477.RAD21.MDM_H5N1 116 bp overlap
RBFOX2 1 dataset
ChIP HepG2 ENCFF554DMZ 176 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 54 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 113 bp overlap
SSRP1 1 dataset
ChIP hiF-T GSE98758.SSRP1.hiF-T 118 bp overlap
TAF1 1 dataset
ChIP HeLa-S3 ENCFF556LCN 164 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 176 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF582MWI 106 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 176 bp overlap
ZNF449 2 datasets
ChIP HEK293 ENCFF764ZIC 176 bp overlap
ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 163 bp overlap