Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

51 transcription factors

Cebpa 1 dataset

ChIP BLaER1 ENCFF460KDD 218 bp overlap

Crx 1 dataset

Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap

Dmbx1 1 dataset

Motif DE_36h DE_36h-Dmbx1_MA0883.2 10 bp overlap

Dux 2 datasets

Motif DE_36h DE_36h-Dux_MA0611.3 11 bp overlap

Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 255 bp overlap

ESR1 1 dataset

ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 59 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_36h DE_36h-EWSR1-FLI1_MA0149.1 18 bp overlap

FOXA2 3 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 264 bp overlap

ChIP DE DE-FOXA2-1 660 bp overlap

ChIP DE DE-FOXA2-2 550 bp overlap

GATA1 1 dataset

ChIP K-562 GSE107726.GATA1.K-562 189 bp overlap

GATA3_Nter 1 dataset

ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 161 bp overlap

GATA4 4 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap

ChIP DE DE-GATA4-1 741 bp overlap

ChIP DE DE-GATA4-2 735 bp overlap

ChIP foregut GSE117136.GATA4.foregut 587 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 715 bp overlap

ChIP DE DE-GATA6-2 715 bp overlap

Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 378 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 778 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 717 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 785 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 413 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 641 bp overlap

ChIP foregut GSE117136.GATA6.foregut 427 bp overlap

GSC 1 dataset

Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap

Gata3 1 dataset

Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap

HMGA2 1 dataset

ChIP WTC11 ENCFF535JLP 92 bp overlap

HSF1 2 datasets

Motif DE_36h DE_36h-HSF1_MA0486.2 13 bp overlap

Motif DE_60h DE_60h-HSF1_MA0486.2 13 bp overlap

Hmga1 1 dataset

Motif DE_36h DE_36h-Hmga1_MA2124.1 8 bp overlap

LIN54 1 dataset

Motif DE_36h DE_36h-LIN54_MA0619.2 7 bp overlap

MXI1 1 dataset

Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap

MYCN 1 dataset

ChIP CHP-134 GSE129588.MYCN.CHP-134 250 bp overlap

MZF1 1 dataset

Motif DE_36h DE_36h-MZF1_MA0056.3 8 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 298 bp overlap

OTX1 1 dataset

Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap

OTX2 1 dataset

Motif DE_36h DE_36h-OTX2_MA0712.3 7 bp overlap

PITX1 1 dataset

Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap

PITX3 1 dataset

Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap

POU2F3 1 dataset

Motif DE_36h DE_36h-POU2F3_MA0627.3 9 bp overlap

POU5F1B 1 dataset

Motif DE_36h DE_36h-POU5F1B_MA0792.1 9 bp overlap

PRDM15 1 dataset

ChIP WTC11 ENCFF108TMF 401 bp overlap

RBPJ 2 datasets

Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap

Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap

RHOXF1 1 dataset

Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap

Rarb 1 dataset

Motif DE_36h DE_36h-Rarb_MA0857.1 16 bp overlap

Rarg 1 dataset

Motif DE_36h DE_36h-Rarg_MA0859.2 15 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 465 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 645 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 485 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 363 bp overlap

SP5 2 datasets

Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap

Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap

TEAD4 1 dataset

ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 313 bp overlap

TRPS1 1 dataset

Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap

ZIC1 2 datasets

Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap

Motif DE_60h DE_60h-ZIC1_MA0696.1 14 bp overlap

ZKSCAN5 2 datasets

Motif DE_36h DE_36h-ZKSCAN5_MA1652.2 9 bp overlap

Motif DE_60h DE_60h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF189 2 datasets

Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap

Motif DE_60h DE_60h-ZNF189_MA1725.2 9 bp overlap

ZNF274 1 dataset

Motif DE_60h DE_60h-ZNF274_MA1592.2 12 bp overlap

ZNF324 2 datasets

Motif DE_36h DE_36h-ZNF324_MA1977.2 14 bp overlap

Motif DE_60h DE_60h-ZNF324_MA1977.2 14 bp overlap

ZNF341 2 datasets

Motif DE_36h DE_36h-ZNF341_MA1655.2 8 bp overlap

Motif DE_60h DE_60h-ZNF341_MA1655.2 8 bp overlap

ZNF410 2 datasets

Motif DE_36h DE_36h-ZNF410_MA0752.2 16 bp overlap

Motif DE_60h DE_60h-ZNF410_MA0752.2 16 bp overlap

ZNF701 2 datasets

Motif DE_36h DE_36h-ZNF701_MA1987.2 17 bp overlap

Motif DE_60h DE_60h-ZNF701_MA1987.2 17 bp overlap

ZNF8 2 datasets

Motif DE_36h DE_36h-ZNF8_MA1718.1 20 bp overlap

Motif DE_60h DE_60h-ZNF8_MA1718.1 20 bp overlap

ZNF816 3 datasets

Motif DE_36h DE_36h-ZNF816_MA1719.2 15 bp overlap

Motif DE_60h DE_60h-ZNF816_MA1719.2 15 bp overlap

ZSCAN5C 1 dataset

ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 259 bp overlap

Genome Browser