chr5 : 62,649,557 62,649,768
211 bp 31 TFs 0 linked genes
This 211 bp open chromatin element has no linked target genes and is bound by 31 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:62,644,557 – 62,654,768
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP_ETOH GSE69043.AR.LNCaP_ETOH 133 bp overlap
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 159 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 173 bp overlap
ATF3 2 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 112 bp overlap
ChIP K562 ENCFF921JQW 209 bp overlap
ATF7 3 datasets
ChIP GM12878 ENCFF037PYH 70 bp overlap
ChIP K-562 ENCSR972ZBV.ATF7.K-562 184 bp overlap
ChIP K562 ENCFF308SKS 153 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 178 bp overlap
BRD4 6 datasets
ChIP MM1-S GSE43743.BRD4.MM1-S 211 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 211 bp overlap
ChIP MM1-S_DMSO GSE42161.BRD4.MM1-S_DMSO 211 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 192 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 211 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 179 bp overlap
CDK9 1 dataset
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 186 bp overlap
CREB1 1 dataset
ChIP MCF-7 ENCFF341ZEM 69 bp overlap
CTCF 6 datasets
ChIP DND-41 ENCFF913MRA 142 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 192 bp overlap
ChIP MM.1S ENCFF869JMQ 194 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 149 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 202 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 211 bp overlap
ELF1 2 datasets
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 143 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 124 bp overlap
GATA2 14 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 141 bp overlap
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 137 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 211 bp overlap
ChIP K562 ENCFF830LLA 211 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 211 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 211 bp overlap
ChIP SH-SY5Y ENCFF485YIB 160 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 211 bp overlap
ChIP SK-N-SH ENCFF764OZD 211 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 207 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 211 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 181 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 131 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 170 bp overlap
GATA3 13 datasets
ChIP BE2C GSE65664.GATA3.BE2C 208 bp overlap
ChIP CCRF-CEM GSE33850.GATA3.CCRF-CEM 145 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 203 bp overlap
ChIP Jurkat GSE76181.GATA3.Jurkat 211 bp overlap
ChIP Jurkat GSE120063.GATA3.Jurkat 211 bp overlap
ChIP Jurkat GSE68976.GATA3.Jurkat 211 bp overlap
ChIP Jurkat GSE29180.GATA3.Jurkat 211 bp overlap
ChIP MCF-7 ENCFF352QVM 211 bp overlap
ChIP MCF-7 ENCFF352QVM 99 bp overlap
ChIP SH-SY5Y ENCFF475HYF 211 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 205 bp overlap
ChIP SK-N-SH ENCFF040SSB 211 bp overlap
ChIP thymocyte GSE71751.GATA3.thymocyte 211 bp overlap
JUND 1 dataset
ChIP K562 ENCFF336RCR 87 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 124 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 167 bp overlap
MED1 3 datasets
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 211 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 146 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 211 bp overlap
MYB 1 dataset
ChIP Jurkat GSE59657.MYB.Jurkat 211 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 142 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 211 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF044PYR 211 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 106 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 115 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 140 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 163 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 183 bp overlap
SPI1 2 datasets
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 182 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 164 bp overlap
TCF4 2 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 165 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 207 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 101 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 142 bp overlap