chr1 : 90,728,650 – 90,728,880
230 bp 32 TFs 1 linked gene
This 230 bp open chromatin element is linked to ENSG00000287076 and is bound by 32 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000287076 9.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:90,723,650 – 90,733,880
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 230 bp overlap
CBX7 5 datasets
ChIP HEK293T_PCGF2fl GSE119618.CBX7.HEK293T_PCGF2fl 82 bp overlap
ChIP hESC GSE133412.CBX7.hESC 150 bp overlap
ChIP hESC_QKO GSE133412.CBX7.hESC_QKO 58 bp overlap
ChIP hESC_TKO GSE133412.CBX7.hESC_TKO 130 bp overlap
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 230 bp overlap
CBX8 1 dataset
ChIP H1 ENCFF095JHA 195 bp overlap
CTCF 1 dataset
ChIP glutamatergic neuron ENCFF816BTR 130 bp overlap
E2F6 1 dataset
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
EP300 1 dataset
ChIP tibial nerve ENCFF346AYA 64 bp overlap
EWSR1-FLI1 1 dataset
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 22 datasets
ChIP GM23248 ENCFF404ZHM 230 bp overlap
ChIP GM23248 ENCFF404ZHM 94 bp overlap
ChIP GM23338 ENCFF613YON 67 bp overlap
ChIP H1 ENCFF232NZA 230 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 99 bp overlap
ChIP MM.1S ENCFF966SYG 118 bp overlap
ChIP astrocyte ENCFF365JTP 230 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 149 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 230 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 230 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 224 bp overlap
ChIP fibroblast of lung ENCFF479BAW 230 bp overlap
ChIP fibroblast of lung ENCFF479BAW 162 bp overlap
ChIP hepatocyte ENCFF552DZB 230 bp overlap
ChIP hepatocyte ENCFF552DZB 230 bp overlap
ChIP hepatocyte ENCFF552DZB 230 bp overlap
ChIP keratinocyte ENCFF070STK 230 bp overlap
ChIP keratinocyte ENCFF070STK 50 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 145 bp overlap
ChIP neural progenitor cell ENCFF018MKA 230 bp overlap
ChIP neural progenitor cell ENCFF472NFV 230 bp overlap
ChIP neural progenitor cell ENCFF472NFV 230 bp overlap
GATA6 4 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 230 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 230 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 230 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 230 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 230 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 71 bp overlap
NFXL1 2 datasets
ChIP K-562 ENCSR085DDI.NFXL1.K-562 210 bp overlap
ChIP K562 ENCFF619QDE 230 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 56 bp overlap
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 56 bp overlap
PCGF2 2 datasets
ChIP HEK293T_PCGF2fl GSE119618.PCGF2.HEK293T_PCGF2fl 78 bp overlap
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 230 bp overlap
RNF2 1 dataset
ChIP HEK293T_RING1Bfl GSE119618.RNF2.HEK293T_RING1Bfl 55 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 204 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 230 bp overlap
SMARCC1 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 223 bp overlap
SP1 1 dataset
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
SP4 3 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 4 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
SUZ12 7 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 135 bp overlap
ChIP HEK293T_PCGF1352fl GSE119618.SUZ12.HEK293T_PCGF1352fl 100 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.SUZ12.HEK293T_PCGF1356fl 105 bp overlap
ChIP HEK293T_PCGF1356fl_OHT GSE119618.SUZ12.HEK293T_PCGF1356fl_OHT 92 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 100 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 72 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 230 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 59 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 117 bp overlap
ZFP14 2 datasets
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
ZNF143 3 datasets
Motif DE_12h DE_12h-ZNF143_MA0088.2 16 bp overlap
Motif ES_0h ES_0h-ZNF143_MA0088.2 16 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 157 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF263 9 datasets
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap
ChIP HEK293 ENCFF336CWQ 225 bp overlap
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 203 bp overlap
ChIP HepG2 ENCFF626SSV 230 bp overlap
ChIP K-562 ENCSR000EWN.ZNF263.K-562 205 bp overlap
ChIP K562 ENCFF640RNA 230 bp overlap
ChIP WTC11 ENCFF893RTM 230 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF460 3 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
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